Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of mature fruits, root tips and leaves from wild type, vector control and trangenic tomato plants expressing InsP 5-ptase


ABSTRACT: To reduce the level of major second messenger inositol-1,4,5-triphosphate (InsP3), we generated transgenic tomato plants (cv. Micro-Tom) that are expressing InsP 5-ptase gene. To understand effects of transgene (InsP 5-ptase) on gene expression we carried out microarray analysis from different parts of transgenic and control (wild type, empty vector control) tomato plants; Objectives for this study included the identification of genes that were up or down-regulated at the transcriptional level in transgenic tomato plants expressing InsP 5-ptase gene Experiment Overall Design: Ripe fruits of wild type, vector control and two transgenic tomato lines expressing InsP 5-ptase gene were selected for RNA extraction and hybridization on Affymetrix microarrays Experiment Overall Design: First two leaves of 10 day old light grown in vitro seedlings of wild type, vector control and two transgenic tomato lines expressing InsP 5-ptase gene were selected for RNA extraction and hybridization on Affymetrix microarrays Experiment Overall Design: 10 day old etiolated root tips of wild type, vector control and two transgenic tomato lines expressing InsP 5-ptase gene were selected for RNA extraction and hybridization on Affymetrix microarrays

ORGANISM(S): Solanum lycopersicum

SUBMITTER: Mariya Khodakovskaya 

PROVIDER: E-GEOD-9683 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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