Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of wild type and mutant fission yeast exposed to different intensities of H202 and two other oxidants


ABSTRACT: We studied transcriptional responses of the fission yeast Schizosaccharomyces pombe to different intensities of H2O2 stress as well as two other oxidants: menadione sodium bisulfite and tert-butyl hydroperoxide. DNA microarrays were used to study the changes in expression profiles and the transcriptional regulation. We compare and contrast global expression and regulation of different intensities of H2O2 stress and different oxidants. The transcriptional response to low doses of H2O2 is very similar to menadione sodium bisulfite and the genes were controlled primarily by the transcription factor Pap1. The transcriptional response to medium and high doses of H2O2 is very similar to tert-butyl hydroperoxide and the genes were mostly regulated by the stress-activated MAP kinase Sty1p and the transcription factor Atf1p. We also compare global regulation of oxidative stress genes in fission and budding yeasts and discuss evolutionary implications.

INSTRUMENT(S): Scanning hardware

ORGANISM(S): Schizosaccharomyces pombe

SUBMITTER: dongrong chen 

PROVIDER: E-MEXP-1083 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Multiple pathways differentially regulate global oxidative stress responses in fission yeast.

Chen Dongrong D   Wilkinson Caroline R M CR   Watt Stephen S   Penkett Christopher J CJ   Toone W Mark WM   Jones Nic N   Bähler Jürg J  

Molecular biology of the cell 20071114 1


Cellular protection against oxidative damage is relevant to ageing and numerous diseases. We analyzed the diversity of genome-wide gene expression programs and their regulation in response to various types and doses of oxidants in Schizosaccharomyces pombe. A small core gene set, regulated by the AP-1-like factor Pap1p and the two-component regulator Prr1p, was universally induced irrespective of oxidant and dose. Strong oxidative stresses led to a much larger transcriptional response. The mitog  ...[more]

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