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Comparative genomic hybridization of 17 strains of Ralstonia solanacearum, one strain of R. syzygii and one strain of R. pickettii

ABSTRACT: comparison of gene content between 17 strains of Ralstonia solanacearum, one strain of R. syzygii and one strain of R. pickettii

INSTRUMENT(S): GenePix 4000A [Axon Instruments]

ORGANISM(S): Ralstonia solanacearum

SUBMITTER: Jens Schoenfeld 

PROVIDER: E-MEXP-851 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Genomic structure and phylogeny of the plant pathogen Ralstonia solanacearum inferred from gene distribution analysis.

Guidot Alice A   Prior Philippe P   Schoenfeld Jens J   Carrère Sébastien S   Genin Stéphane S   Boucher Christian C  

Journal of bacteriology 20061103 2

In the present study, we investigated the gene distribution among strains of the highly polymorphic plant pathogenic beta-proteobacterium Ralstonia solanacearum, paying particular attention to the status of known or candidate pathogenicity genes. Based on the use of comparative genomic hybridization on a pangenomic microarray for the GMI1000 reference strain, we have defined the conditions that allowed comparison of the repertoires of genes among a collection of 18 strains that are representativ  ...[more]

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