Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

ChIP-Seq with anti-FLAG antibodies to determine binding of LexA-3xFLAG to DNA in Streptomyces venezuelae treated with Mitomycin C (MMC) overnight


ABSTRACT: LexA is a transcriptional repressor for genes requiring expression primarily during SOS response in response to stress such as that caused by DNA alkylating agent Mitomycin C (MMC). LexA undergoes self-cleavage under stress conditions thereby lifting the repression on genes whose expression is required for stress response. In our experiment LexA binding sites in the genome were determined in untreated and MMC treated (overnight, 14h) cultures using a LexA-3xFLAG strain and anti-FLAG monoclonal antibodies. Wild type Streptomyces venezuelae (unFLAGged LexA) cultures, with and without MMC treatment were used as negative controls.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Streptomyces venezuelae

SUBMITTER: Kathry Stratton 

PROVIDER: E-MTAB-11603 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2019-01-14 | E-MTAB-7450 | biostudies-arrayexpress
2019-08-01 | E-MTAB-8160 | biostudies-arrayexpress
2010-05-19 | E-GEOD-12634 | biostudies-arrayexpress
2015-05-19 | E-MTAB-2698 | biostudies-arrayexpress
2019-04-24 | E-MTAB-7827 | biostudies-arrayexpress
2016-07-03 | E-MTAB-2196 | biostudies-arrayexpress
2006-04-18 | GSE4673 | GEO
2018-12-31 | E-MTAB-6702 | biostudies-arrayexpress
2009-08-11 | E-MEXP-1527 | biostudies-arrayexpress
2011-05-19 | E-GEOD-28734 | biostudies-arrayexpress