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Whole Genome Sequencing of splenocytes from Four Core Genotype (FCG) mice

ABSTRACT: This repository contains whole genome sequencing data from mice of the Four Core Genotypes cross. By crossing mice with both a deletion of the sex-determining factor Sry on the Y-chromosome and a transgenic insertion of Sry on Chromosome 3 , four combinations of gonadal (testis or ovaries) and chromosomal (XX or XY) are generated, namely XYSry-Chr3Sry+ (gonadal and chromosomal males), XYSry- (gonadal females, chromosomal males), XX (gonadal and chromosomal females), XXChr3Sry+ (gonadal males, chromosomal females). The transgenes were on a C57BL6 genetic background which is crossed with a CAST/EiJ female to allow for the distinction of the parental haplotypes, or on a pure-bred C57BL6 background. DNA sequencing was done on either liver or ear-punch samples.

INSTRUMENT(S): NextSeq 2000

ORGANISM(S): Mus musculus

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PROVIDER: E-MTAB-13585 | biostudies-arrayexpress |

SECONDARY ACCESSION(S): ERP155772E-MTAB-13586

REPOSITORIES: biostudies-arrayexpress

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