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RNA sequencing of marmoset embryonic development

ABSTRACT: Transcriptional profiling of common marmoset embryo stages spanning E5.0 to E7.0 was performed by RNA-seq.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Callithrix jacchus

SUBMITTER: Paul Bertone

PROVIDER: E-MTAB-2959 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Lineage-Specific Profiling Delineates the Emergence and Progression of Naive Pluripotency in Mammalian Embryogenesis.

Boroviak Thorsten T Loos Remco R Loos Remco R Lombard Patrick P Okahara Junko J Behr Rüdiger R Sasaki Erika E Nichols Jennifer J Smith Austin A Bertone Paul P

Developmental cell 20151101 3

Naive pluripotency is manifest in the preimplantation mammalian embryo. Here we determine transcriptome dynamics of mouse development from the eight-cell stage to postimplantation using lineage-specific RNA sequencing. This method combines high sensitivity and reporter-based fate assignment to acquire the full spectrum of gene expression from discrete embryonic cell types. We define expression modules indicative of developmental state and temporal regulatory patterns marking the establishment an ...[more]

PMID: 26555056

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RNA sequencing of mouse embryonic development

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Alternative Capture of Noncoding RNAs or Protein-Coding Genes by Herpesviruses to Alter Host T-Cell Function

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A YAP/TAZ-TEAD signaling module links endothelial nutrient acquisition to angiogenic growth

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Genome-wide Promoter Mapping of Histone H3 Lysine 4 and Lysine 27 Methylation in Preimplantation Embryos

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Human and marmoset trophoblast stem cells differ in signalling requirements and recapitulate divergent modes of trophoblast invasion

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Identification of Oct4-dependent genes in vivo

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