Time series RNA-seq of temperature-entrained and light-entrained bloodstream and procyclic form Trypanosoma brucei cultures
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ABSTRACT: To address whether T. brucei has a circadian clock we probed its transcriptome by RNA-seq, searching for transcripts oscillating with a 24 hr period. For this we entrained/ synchronized parasites in vitro for three days using temperature and light as environmental stimuli and then collected parasite RNA every four hours for two consecutive days. Parasite RNA was subjected to RNA-seq analysis. We performed this protocol on two stages of the T. brucei life cycle (bloodstream and insect procyclic forms).
INSTRUMENT(S): Illumina HiSeq 2000
ORGANISM(S): Trypanosoma brucei
SUBMITTER: Daniel Neves
PROVIDER: E-MTAB-4952 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
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