Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptional responses induced by pediocin PA-1 exposure of Enterococcus faecalis V583 and a V583 strain expressing pediocin immunity

ABSTRACT: Trancriptional response of pediocin exposure of V583 and V583 expressing immunity (petAIM), and the transcriptional response of petAIM compared to both V583 and V583 containing the vector pet.

ORGANISM(S): Enterococcus faecalis

SUBMITTER: Mona Opsata

PROVIDER: E-MTAB-655 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of Enterococcus faecalis V583 in response to NaCl

Project description:The effects of NaCl on transcriptional events were studied by means of genome wide microarrays in Enterococcus faecalis V583. Transcriptional profiles were obtained through time series experiments over periods of 60min.

2010-08-01 | E-TABM-904 | biostudies-arrayexpress

Transcriptional profiling of wild type vs rex-deficient mutants of Enterococcus faecalis V583

Project description:The transcriptional profiles of wild type Enterococcus faecalis V583 and two rex-deficient mutants (EF2638 and EF2933) were compared

2013-03-07 | E-MTAB-1219 | biostudies-arrayexpress

The SOS response controls intrinsic resistance to cephalosporins

Project description:Comparison of the transcription profile between Enterococcus faecalis V583 strain and its mutant having a constitutive SOS response

2017-07-05 | E-MEXP-3861 | biostudies-arrayexpress

Transcription profiling of Enterococcus faecalis during growth in urine

Project description:Differences in gene content between three test strains were first assessed by comparative genomic hybridization using an E. faecalis V583 oligo array and with E. faecalis V583 as a reference strain . Transcriptional profiles of the same three test strains were then obtained through time series experiments over periods of 30min.

2010-06-01 | E-TABM-885 | biostudies-arrayexpress

Transcriptional analysis of Enterococcus faecalis V583 in three different growth

Project description:We have studied the effects of three different growth rate (0.05h (-1), 0.15h (-1) and 0.4h(-1) on the trancriptome of E. faecalis grown under energy limitation in chemostat culture

2011-11-09 | E-MTAB-725 | biostudies-arrayexpress

Transcriptomic analysis of lactate dehydrogenase negative mutant of Enterococcus faecalis V583

Project description:In order to study the effect of lactate dehydrogenase (?ldh 1.2) mutant on the transcriptome DNA microarray technology was used. Stains were grown in a chemically defined medium (CDM-LAB) containing 1.1% of glucose as a carbon sources at 37?C on anaerobic condition to an optical density of 0.6.

2010-12-13 | E-MTAB-472 | biostudies-arrayexpress

Transcription profiling by array of Lactobacillus sakei strains grown on ribose or glucose to study ribose catabolism

Project description:We used a whole-genome microarray based on the sequenced strain Lactobacillus sakei 23K to study ribose catabolism in three Lactobacillus sakei strains by screening for differentially expressed genes when grown on ribose compared to glucose

2010-12-01 | E-MEXP-2892 | biostudies-arrayexpress

Transcription profiling by array of Enterococcus faecalis V583 spontaneous pediocin PA-1 mutants MOP1, MOP2 and MOP5 and delta-mptD mutant MOM1 to study class IIa bacteriocin resistance

Project description:The transcriptional responses of class IIa bacteriocin resistance in 4 mutants of Enterococcus faecalis V583; three spontaneous pediocin PA-1 mutants; MOP1, MOP2 and MOP5 and one delta-mptD mutant called MOM1, studied by microarrays in E. faecalis V583.

2011-03-03 | E-TABM-934 | biostudies-arrayexpress

Comparative genomic hybridization of Enterococcus faecalis isolates from healthy Norwegian babies

Project description:Comparative genomic hybridization of 9 Norwegian E. faecalis baby isolates with E. faecalis V583 as a reference strain using an E. faecalis V583 oligo array. Total gene content was analyzed by whole genome microarrays.

2009-05-05 | E-TABM-466 | biostudies-arrayexpress

Transcription profiling of Enterococcus faecalis V583 treated with SDS and bovine bile

Project description:The effects of bovine bile and SDS on transcriptional events were studied by means of genome wide microarrays in Enterococcus faecalis V583. Transcriptional profiles were obtained through time series experiments over periods of 120min for cells treated with bile and the combination of SDS and bile, and 360min. for SDS.

2007-08-01 | E-TABM-242 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data