Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Transcription profiling by array of embryonal carcinoma cell line P19 with or without expressoin of Blimp1-EGFP fusion protein over a 48-hour time-course to study the role of Blimp1 in transcription regulation in pluripotent embryonic cells


ABSTRACT: Genome-wide expression analysis was performed with the aim of investigating transcriptional changes mediated by the transcription factor B lymphocyte-induced maturation protein-1 (Blimp1) in the context of pluripotent embryonic cells, with the aim of drawing parallels to its functions in mouse primordial germ cells.

ORGANISM(S): Mus musculus

SUBMITTER: Erna Magnúsdóttir 

PROVIDER: E-MTAB-865 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

A tripartite transcription factor network regulates primordial germ cell specification in mice.

Magnúsdóttir Erna E   Dietmann Sabine S   Murakami Kazuhiro K   Günesdogan Ufuk U   Tang Fuchou F   Bao Siqin S   Diamanti Evangelia E   Lao Kaiqin K   Gottgens Berthold B   Azim Surani M M  

Nature cell biology 20130714 8


Transitions in cell states are controlled by combinatorial actions of transcription factors. BLIMP1, the key regulator of primordial germ cell (PGC) specification, apparently acts together with PRDM14 and AP2γ. To investigate their individual and combinatorial functions, we first sought an in vitro system for transcriptional readouts and chromatin immunoprecipitation sequencing analysis. We then integrated this data with information from single-cell transcriptome analysis of normal and mutant PG  ...[more]

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