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CABYR RNAi plasmid construction and NF-?B signal transduction pathway.


ABSTRACT: AIM:To construct the CABYR RNAi plasmid and study its relation with the nuclear factor (NF)-?B signal transduction pathway. METHODS:Human CABYR mRNA sequence was obtained from GenBank. The structure of cDNA sequence for the short hairpin RNA was BbsI + sense + loop + antisense + transcription terminator + KpnI + BamHI. A CABYR silencing plasmid was constructed and transfected into the human embryo cell line 293T. Quantitative real-time polymerase chain reaction was used to analyze CABYR and NF-?B gene expression. RESULTS:The CABYR and NF-?B expressions were detected in 293T cells. The oligonucleotide (5'-GCTCAGATGTTAGGTAAAG-3') efficiently silenced the expression of CABYR. The expression of NF-?B was not significantly affected by silencing CABYR (P = 0.743). CONCLUSION:CABYR can be found in the human embryo cell line 293T. Cabyrmid 2 can efficiently silence its target, CABYR, indicating that CABYR is not related with the NF-?B signal transduction pathway.

SUBMITTER: Shi LX 

PROVIDER: S-EPMC2957608 | biostudies-literature | 2010 Oct

REPOSITORIES: biostudies-literature

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CABYR RNAi plasmid construction and NF-κB signal transduction pathway.

Shi Lin-Xiang LX   He Yao-Ming YM   Fang Lin L   Meng Hong-Bo HB   Zheng Li-Jun LJ  

World journal of gastroenterology 20101001 39


<h4>Aim</h4>To construct the CABYR RNAi plasmid and study its relation with the nuclear factor (NF)-κB signal transduction pathway.<h4>Methods</h4>Human CABYR mRNA sequence was obtained from GenBank. The structure of cDNA sequence for the short hairpin RNA was BbsI + sense + loop + antisense + transcription terminator + KpnI + BamHI. A CABYR silencing plasmid was constructed and transfected into the human embryo cell line 293T. Quantitative real-time polymerase chain reaction was used to analyze  ...[more]

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