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[N,N,N',N'-Tetra-kis(benzimidazol-2-yl-meth-yl)cyclo-hexane-1,2-diamine]-nickel(II) dinitrate dihydrate.

ABSTRACT: In the title compound, [Ni(C(38)H(38)N(10))](NO(3))(2)·2H(2)O, the Ni(II) ion is located on a crystallographic twofold rotation axis and is in a distorted octa-hedral coordination environment. The crystal structure is stablized by inter-molecular N-H?O and C-H?O hydrogen bonds, and weak C-H?? inter-actions. The O atoms of the unique nitrate ion are disordered over two sites with occupancies of 0.63?(1) and 0.37?(1). In addition, the O atom of the unique solvent water mol-ecule is disorded over two sites with equal occupancies.

SUBMITTER: Zhan D

PROVIDER: S-EPMC2959773 | biostudies-literature | 2008 Oct

REPOSITORIES: biostudies-literature

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[N,N,N',N'-Tetra-kis(benzimidazol-2-yl-meth-yl)cyclo-hexane-1,2-diamine]-nickel(II) dinitrate dihydrate.

Zhan Dan D Xiao Zuo-An ZA

Acta crystallographica. Section E, Structure reports online 20081004 Pt 11

In the title compound, [Ni(C(38)H(38)N(10))](NO(3))(2)·2H(2)O, the Ni(II) ion is located on a crystallographic twofold rotation axis and is in a distorted octa-hedral coordination environment. The crystal structure is stablized by inter-molecular N-H⋯O and C-H⋯O hydrogen bonds, and weak C-H⋯π inter-actions. The O atoms of the unique nitrate ion are disordered over two sites with occupancies of 0.63 (1) and 0.37 (1). In addition, the O atom of the unique solvent water mol-ecule is disorded over t ...[more]

PMID: 21580822

Similar Datasets

(Nitrato-?O){N,N,N',N'-tetra-kis-[(1H-benzimidazol-2-yl-?N)meth-yl]cyclo-hexane-1,2-diamine}-lead(II) hemiaqua-{N,N,N',N'-tetra-kis-[(1H-benzimidazol-2-yl-?N)meth-yl]cyclo-hexane-1,2-diamine}-lead(II) trinitrate dihydrate.

Project description:In the title compound, [Pb(NO(3))(C(38)H(38)N(10))][Pb(C(38)H(38)N(10))(H(2)O)(0.5)](NO(3))(3)·2H(2)O, both Pb(II) ions are coordinated in a distorted trigonal-prismatic environment by a hexa-dentate N,N,N',N'-tetra-kis-[(1H-benzimidazol-2-yl)meth-yl]cyclo-hex-ane-1,2-diamine ligand. A nitrate and a half-occupancy water ligand form long coordination bonds to the Pb(II) ions capping the trigonal-prismatic environment. In the crystal, the components are linked by N-H?O and O-H?O hydrogen bonds, forming a three-dimensional network. C-H?O inter-actions also occur.

| S-EPMC3238748 | biostudies-literature

[N,N,N',N'-Tetra-kis(benzimidazol-2-ylmeth-yl)cyclo-hexane-1,2-trans-diamine]-iron(II) bis-(perchlorate) methanol solvate.

Project description:In the title compound, [Fe(C(38)H(38)N(10))](ClO(4))(2)·CH(3)OH, the Fe(II) atom has a distorted octa-hedral coordination environment with four benzimidazol N atoms and two amino N atoms from an N,N,N',N'-tetra-kis-(benzimidazol-2-ylmeth-yl)cyclo-hexane-1,2-trans-diamine ligand. The uncoordinated solvent methanol mol-ecule is hydrogen bonded to an O atom of a perchlorate anion. One of the perchlorate anions is disordered over two sets of sites with occupancy factors of 0.539?(14) and 0.461?(14). N-H?O and C-H?O hydrogen bonds, as well as ?-? stacking inter-actions between the imidazol rings and between the imidazol and benzene rings [centroid-centroid distances = 3.714?(2) and 3.705?(2)?Å] give rise to a three-dimensional network.

| S-EPMC3089232 | biostudies-literature

Perchlorato[N,N,N',N'-tetra-kis(2-pyridyl-meth-yl)cyclo-hexane-1,2-diamine]manganese(II) perchlorate.

Project description:The asymmetric unit of the title compound, [Mn(ClO(4))(C(30)H(34)N(6))]ClO(4), consists of a cationic [Mn(ClO(4))(C(30)H(34)N(6))](+) complex and a perchlorate anion. In the complex, the Mn(2+) ion is seven-coordinated in an approximately penta-gonal-bipyramidal environment by six N atoms from the hexa-dentate N,N,N',N'-tetra-kis(2-pyridylmeth-yl)-cyclo-hexane-1,2-diamine (tpdach) ligand and one O atom from a perchlorate anion. The complex displays inter-molecular ?-? inter-actions between adjacent pyridine rings (centroid-to-centroid distance 4.133?Å). Moreover, there are weak intra- and inter-molecular C-H?O hydrogen bonds. The Cl atom and two O atoms of the perchlorate are disordered, with a site-occupancy factor of 0.59?(2) for the major component.

| S-EPMC2960601 | biostudies-literature

(R,R)-N,N'-Bis(ferrocenylmeth-yl)cyclo-hexane-1,2-diamine.

Project description:In the structure of the title compound, [Fe(2)(C(5)H(5))(2)(C(18)H(24)N(2))], the cyclo-hexane ring has a chair configuration and the two ferrocenemethyl-amino groups are bonded to it equatorially, as expected. The configuration of the two ferrocence nuclei may be due to intra-molecular N-H?N hydrogen bonding involving the two NH groups.

| S-EPMC2977100 | biostudies-literature

(1R,2R)-N,N'-Dimethyl-cyclo-hexane-1,2-diamine.

Project description:The molecule of the title compound, C(8)H(18)N(2), possesses C(2) symmetry. Owing to its stereochemistry, it is used in the synthesis of chiral ligands and metal complexes for asymmetric synthesis. The cyclo-hexane ring shows a chair conformation with the amino groups in equatorial positions. Contrary to the literature, the title compound is not a liquid, but a crystalline solid at room temperature (293 K). The absolute configuration is assigned from the synthesis.

| S-EPMC2960996 | biostudies-literature

[N,N,N',N'-Tetra-kis(benzimidazol-2-yl-meth-yl)ethane-1,2-diamine]copper(II) sulfate monohydrate.

Project description:In the title compound, [Cu(C(34)H(32)N(10))]SO(4)·H(2)O, the Cu(II) ion is coordinated by six N atoms of a hexa-dentate N,N,N',N'-tetra-kis(benzimidazol-2-ylmeth-yl)ethane-1,2-diamine (EDTB) ligand, in a distorted octa-hedral environment. In the crystal structure, inter-molecular N-H?O and weak C-H?O hydrogen bonds connect the cations, anions and water mol-ecules into a three-dimensional network. The O atoms of the anion are disordered over two sites with refined occupancies of 0.711?(2) and 0.289?(2).

| S-EPMC2971061 | biostudies-literature

(1R,2R)-N,N'-Bis[1-(2-pyrid-yl)ethyl-idene]cyclo-hexane-1,2-diamine.

Project description:In the title compound, C(20)H(24)N(4), the cyclo-hexane ring adopts a chair conformation with the two imine groups linked at equatorial positions. The two halves of the mol-ecule are related by a crystallographic twofold rotation axis. The dihedral angle between the pyridine rings is 75.73?(3)°.

| S-EPMC2979034 | biostudies-literature

trans-Diaqua-bis-(cyclo-hexane-1,2-diamine)-zinc(II) dichloride.

Project description:In the title compound, [Zn(C(6)H(14)N(2))(2)(H(2)O)(2)]Cl(2), the Zn(II) atom resides on a special position with site symmetry 2/m and is octa-hedrally coordinated by four N atoms from two trans 1,2-diamino-cyclo-hexane ligands and two water O atoms. In the crystal, N-H⋯Cl and O-H⋯Cl hydrogen bonds link the mol-ecules into a two-dimensional network parallel to the bc plane.

| S-EPMC3099959 | biostudies-literature

Dichlorido[(1R,2R)-N-(pyridin-2-yl-methyl)cyclo-hexane-1,2-diamine-?N,N',N'']mercury(II).

Project description:In the title compound, [HgCl(2)(C(12)H(19)N(3))], the Hg(II) ion is coordinated by three N atoms of the (1R,2R)-N-(pyridin-2-ylmeth-yl)cyclo-hexane-1,2-diamine ligand and by a Cl atom in the basal plane, and by a second Cl atom in the apical position, within a distorted square-pyramidal geometry. The coordination of the enanti-opure ligand to the metal atom renders the central N atom chiral with an S configuration, so the complex is enanti-omerically pure and corresponds to the S,R,R diastereoisomer. Mol-ecules are linked via weak N-H?Cl hydrogen bonds into a one-dimensional hydrogen-bonding supramolecular chain along the crystallographic b axis.

| S-EPMC3297209 | biostudies-literature

(1R*,2S*)-N,N'-Bis[(E)-1H-pyrrol-2-yl-methyl-idene]cyclo-hexane-1,2-diamine monohydrate.

Project description:The title compound, C16H20N4·H2O, was synthesized from cis-1,2-diamino-cyclo-hexane (a racemic mixture of the (1R,2S) and (1S,2R) enanti-omers). The compound crystallized with two mol-ecules (A and B) in the asymmetric unit with a single water solvent mol-ecule per Schiff base mol-ecule. Mol-ecules A and B have similar conformations as illustrated by the least-squares-fit with an r.m.s. deviation of 0.242 Å. The mol-ecules within the asymmetric unit are bridged by hydrogen bonds to the two water mol-ecules, resulting in a heterotetramer. The water mol-ecule acts as both a hydrogen-bond donor and acceptor. The pyrrole-imine units are not co-planar, making an angle of 73.9 (3)° and 76.9 (3)° in mol-ecules A and B, respectively.

| S-EPMC3588954 | biostudies-literature

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