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Copper dioxygen (bio)inorganic chemistry.

ABSTRACT: Cu/O2 intermediates in biological, homogeneous, and heterogeneous catalysts exhibit unique spectral features that reflect novel geometric and electronic structures that make significant contributions to reactivity. This review considers how the respective intermediate electronic structures overcome the spin-forbidden nature of O2 binding, activate O2 for electrophilic aromatic attack and H-atom abstraction, catalyze the 4 e- reduction of O2 to H2O, and discusses the role of exchange coupling between Cu ions in determining reactivity.

SUBMITTER: Solomon EI

PROVIDER: S-EPMC3062954 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature

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Copper dioxygen (bio)inorganic chemistry.

Solomon Edward I EI Ginsbach Jake W JW Heppner David E DE Kieber-Emmons Matthew T MT Kjaergaard Christian H CH Smeets Pieter J PJ Tian Li L Woertink Julia S JS

Faraday discussions 20110101

Cu/O2 intermediates in biological, homogeneous, and heterogeneous catalysts exhibit unique spectral features that reflect novel geometric and electronic structures that make significant contributions to reactivity. This review considers how the respective intermediate electronic structures overcome the spin-forbidden nature of O2 binding, activate O2 for electrophilic aromatic attack and H-atom abstraction, catalyze the 4 e- reduction of O2 to H2O, and discusses the role of exchange coupling bet ...[more]

PMID: 21322475

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Copper(I)-Dioxygen Adducts and Copper Enzyme Mechanisms.

Project description:Primary copper(I)-dioxygen (O2) adducts, cupric-superoxide complexes, have been proposed intermediates in copper-containing dioxygen-activating monooxygenase and oxidase enzymes. Here, mechanisms of C-H activation by reactive copper-(di)oxygen intermediates are discussed, with an emphasis on cupric-superoxide species. Over the past 25 years, many synthetically derived cupric-superoxide model complexes have been reported. Due to the thermal instability of these intermediates, early studies focused on increasing their stability and obtaining physical characterization. More recently, in an effort to gain insight into the possible substrate oxidation step in some copper monooxygenases, several cupric-superoxide complexes have been used as surrogates to probe substrate scope and reaction mechanisms. These cupric superoxides are capable of oxidizing substrates containing weak O-H and C-H bonds. Mechanistic studies for some enzymes and model systems have supported an initial hydrogen-atom abstraction via the cupric-superoxide complex as the first step of substrate oxidation.

| S-EPMC5125784 | biostudies-literature

Dioxygen reactivity of new bispidine-copper complexes.

Project description:The reactivity of copper complexes of three different second-generation bispidine-based ligands (bispidine = 3,7-diazabicyclo[3.3.1]nonane; mono- and bis-tetradentate; exclusively tertiary amine donors) with dioxygen [(reversible) binding of dioxygen by copper(I)] is reported. The UV-vis, electrospray ionization mass spectrometry, electron paramagnetic resonance, and vibrational spectra (resonance Raman) of the dioxygen adducts indicate that, depending on the ligand and reaction conditions, several different species (mono- and dinuclear, superoxo, peroxo, and hydroperoxo), partially in equilibrium with each other, are formed. Minor changes in the ligand structure and/or experimental conditions (solvent, temperature, relative concentrations) allow switching between the different forms. With one of the ligands, an end-on peroxodicopper(II) complex and a mononuclear hydroperoxocopper(II) complex could be characterized. With another ligand, reversible dioxygen binding was observed, leading to a metastable superoxocopper(II) complex. The amount of dioxygen involved in the reversible binding to Cu(I) was determined quantitatively. The mechanism of dioxygen binding as well as the preference of each of the three ligands for a particular dioxygen adduct is discussed on the basis of a computational (density functional theory) analysis.

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Reactivity of a stable copper-dioxygen complex.

Project description:We report the isolation of a room temperature stable dipyrromethene Cu(O2) complex featuring a side-on O2 coordination. Reactivity studies highlight the unique ability of the dioxygen adduct for both hydrogen-atom abstraction and acid/base chemistry towards phenols, demonstrating that side-on superoxide species can be reactive entities.

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Bio-inspired liposomal thrombomodulin conjugate through bio-orthogonal chemistry.

Project description:We report the synthesis of bioinspired liposomal thrombomodulin (TM) conjugates by chemoselective and site-specific liposomal conjugation of recombinant TM at C-terminus. TM is an endothelial cell membrane protein that acts as a major cofactor in the protein C anticoagulant pathway. To closely mimic membrane protein structural features of TM, we proposed membrane-mimetic re-expression of recombinant TM onto liposome. A recombinant TM containing the EGF-like 456 domains and an azidohomoalanine at C-terminus was expressed in E. coli. Conjugation of the recombinant TM onto liposome via Staudinger ligation and copper-free click chemistry were investigated as an optimal platform for exploring membrane protein TM's activity, respectively. The bioinspired liposomal TM conjugates were confirmed with Western blotting and protein C activation activity. The recombinant TM-liposome conjugates showed a 2-fold higher k(cat)/K(m) value for protein C activation than that of the recombinant TM alone, which indicated that the lipid membrane has a beneficiary effect on the recombinant TM's activity. The reported liposomal protein conjugate approach provides a rational design strategy for both studying membrane protein TM's functions and generating a membrane protein TM-based anticoagulant agent.

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Evidence for copper-dioxygen reactivity during alpha-synuclein fibril formation.

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| S-EPMC2880511 | biostudies-literature

Stepwise protonation and electron-transfer reduction of a primary copper-dioxygen adduct.

Project description:The protonation–reduction of a dioxygen adduct with [LCu(I)][B(C6F5)4], cupric superoxo complex [LCu(II)(O2(•–))]+ (1) (L = TMG3tren (1,1,1-tris[2-[N(2)-(1,1,3,3-tetramethylguanidino)]ethyl]amine)) has been investigated. Trifluoroacetic acid (HOAcF) reversibly associates with the superoxo ligand in ([LCu(II)(O2(•–))]+) in a 1:1 adduct [LCu(II)(O2(•–))(HOAcF)](+) (2), as characterized by UV–visible, resonance Raman (rR), nuclear magnetic resonance (NMR), and X-ray absorption (XAS) spectroscopies, along with density functional theory (DFT) calculations. Chemical studies reveal that for the binding of HOAcF with 1 to give 2, Keq = 1.2 × 10(5) M(–1) (?130 °C) and ?H° = ?6.9(7) kcal/mol, ?S° = ?26(4) cal mol(–1) K(–1)). Vibrational (rR) data reveal a significant increase (29 cm(–1)) in vO–O (= 1149 cm(–1)) compared to that known for [LCu(II)(O2(•–))](+) (1). Along with results obtained from XAS and DFT calculations, hydrogen bonding of HOAcF to a superoxo O-atom in 2 is established. Results from NMR spectroscopy of 2 at ?120 °C in 2-methyltetrahydrofuran are also consistent with 1/HOAcF = 1:1 formulation of 2 and with this complex possessing a triplet (S = 1) ground state electronic configuration, as previously determined for 1. The pre-equilibrium acid association to 1 is followed by outer-sphere electron-transfer reduction of 2 by decamethylferrocene (Me10Fc) or octamethylferrocene (Me8Fc), leading to the products H2O2, the corresponding ferrocenium salt, and [LCu(II)(OAcF)](+). Second-order rate constants for electron transfer (ket) were determined to be 1365 M(–1) s(–1) (Me10Fc) and 225 M(–1) s(–1) (Me8Fc) at ?80 °C. The (bio)chemical relevance of the proton-triggered reduction of the metal-bound dioxygen-derived fragment is discussed.

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Bio-inorganic interactions on zeolite surface in blood coagulation

Project description:Bio-inorganic interactions on zeolite surface in blood coagulation

2021-02-11 | PXD024170 | iProX

Thiacycloalkynes for copper-free click chemistry.

Project description: Not available

| S-EPMC3384729 | biostudies-literature

Reversible O-O bond cleavage in copper-dioxygen isomers: impact of anion basicity.

Project description:Low-temperature oxygenation of copper(I) complexes of N,N,N',N'-tetraethylpropane-1,3-diamine yields solutions containing both mu-eta2:eta2-peroxodicopper(II) (P) and bis(mu-oxo)dicopper(III) (O) valence isomers. The P/O equilibrium position depends on the nature of the counteranion; P is favored with more basic anions. Titration and EXAFS experiments as well as DFT calculations suggest that axial donation from a sulfonate anion to the copper centers imparts an electronic/electrostatic bias toward the P isomer.

| S-EPMC2526018 | biostudies-literature

Copper-hydroperoxo-mediated N-debenzylation chemistry mimicking aspects of copper monooxygenases.

Project description:A substantial oxidative N-debenzylation reaction along with PhCHO formation occurs from a hydroperoxo-copper(II) complex that has a dibenzylamino substrate (N(CH 2Ph) 2 appended as a substituent on one pyridyl group of its tripodal tetradentate TMPA (also TPA, (2-pyridylmethyl)amine)) ligand framework. During the course of the (L (N(CH 2 ) (Ph) 2 ))Cu (II)( (-)OOH) reactivity, the formation of a substrate and a (-)OOH-derived (an oxygen atom) alkoxo Cu (II)( (-)OR) complex occurs. The observation that the same Cu (II)( (-)OR) species occurs from Cu (Iota)/PhIO chemistry suggests the possibility that a copper-oxo (cupryl) reactive intermediate forms during the alkoxo species formation; new ESI-MS data provide further support for this high-valent intermediate. A net H atom abstraction chemistry is proposed on the basis of the kinetic isotope effect studies provided here and the previously published study for a closely related Cu (II)( (-)OOH) species incorporating dimethylamine (N(CH 3) 2) as the internal substrate; the Cu (Iota)/PhIO reactivity with similar isotope effect results provides further support. The reactivity of these chemical systems closely resembles the proposed oxidative N-dealkylation mechanisms that are effected by the copper monooxygenases, dopamine beta-monooxygenase (DbetaM) and peptidylglycine- alpha-hydroxylating monooxygenase (PHM).

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