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Ensembl 2013.


ABSTRACT: The Ensembl project (http://www.ensembl.org) provides genome information for sequenced chordate genomes with a particular focus on human, mouse, zebrafish and rat. Our resources include evidenced-based gene sets for all supported species; large-scale whole genome multiple species alignments across vertebrates and clade-specific alignments for eutherian mammals, primates, birds and fish; variation data resources for 17 species and regulation annotations based on ENCODE and other data sets. Ensembl data are accessible through the genome browser at http://www.ensembl.org and through other tools and programmatic interfaces.

SUBMITTER: Flicek P 

PROVIDER: S-EPMC3531136 | biostudies-literature | 2013 Jan

REPOSITORIES: biostudies-literature

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Publications

Ensembl 2013.

Flicek Paul P   Ahmed Ikhlak I   Amode M Ridwan MR   Barrell Daniel D   Beal Kathryn K   Brent Simon S   Carvalho-Silva Denise D   Clapham Peter P   Coates Guy G   Fairley Susan S   Fitzgerald Stephen S   Gil Laurent L   García-Girón Carlos C   Gordon Leo L   Hourlier Thibaut T   Hunt Sarah S   Juettemann Thomas T   Kähäri Andreas K AK   Keenan Stephen S   Komorowska Monika M   Kulesha Eugene E   Longden Ian I   Maurel Thomas T   McLaren William M WM   Muffato Matthieu M   Nag Rishi R   Overduin Bert B   Pignatelli Miguel M   Pritchard Bethan B   Pritchard Emily E   Riat Harpreet Singh HS   Ritchie Graham R S GR   Ruffier Magali M   Schuster Michael M   Sheppard Daniel D   Sobral Daniel D   Taylor Kieron K   Thormann Anja A   Trevanion Stephen S   White Simon S   Wilder Steven P SP   Aken Bronwen L BL   Birney Ewan E   Cunningham Fiona F   Dunham Ian I   Harrow Jennifer J   Herrero Javier J   Hubbard Tim J P TJ   Johnson Nathan N   Kinsella Rhoda R   Parker Anne A   Spudich Giulietta G   Yates Andy A   Yates Andy A   Zadissa Amonida A   Searle Stephen M J SM  

Nucleic acids research 20121130 Database issue


The Ensembl project (http://www.ensembl.org) provides genome information for sequenced chordate genomes with a particular focus on human, mouse, zebrafish and rat. Our resources include evidenced-based gene sets for all supported species; large-scale whole genome multiple species alignments across vertebrates and clade-specific alignments for eutherian mammals, primates, birds and fish; variation data resources for 17 species and regulation annotations based on ENCODE and other data sets. Ensemb  ...[more]

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