Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Studies of iron(III) porphyrinates containing silanethiolate ligands.

ABSTRACT: The chemistry of several iron(III) porphyrinates containing silanethiolate ligands is described. The complexes are prepared by protonolysis reactions of silanethiols with the iron(III) precursors, [Fe(OMe)(TPP)] and [Fe(OH)(H2O)(TMP)] (TPP = dianion of meso-tetraphenylporphine; TMP = dianion of meso-tetramesitylporphine). Each of the compounds has been fully characterized in solution and the solid state. The stability of the silanethiolate complexes versus other iron(III) porphyrinate complexes containing sulfur-based ligands allows for an examination of their reactivity with several biologically relevant small molecules including H2S, NO, and 1-methylimidazole. Electrochemically, the silanethiolate complexes display a quasi-reversible one-electron oxidation event at potentials higher than that observed for an analogous arenethiolate complex. The behavior of these complexes versus other sulfur-ligated iron(III) porphyrinates is discussed.

SUBMITTER: Meininger DJ

PROVIDER: S-EPMC3915880 | biostudies-literature | 2013 Nov

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Studies of iron(III) porphyrinates containing silanethiolate ligands.

Meininger Daniel J DJ Caranto Jonathan D JD Arman Hadi D HD Tonzetich Zachary J ZJ

Inorganic chemistry 20131018 21

The chemistry of several iron(III) porphyrinates containing silanethiolate ligands is described. The complexes are prepared by protonolysis reactions of silanethiols with the iron(III) precursors, [Fe(OMe)(TPP)] and [Fe(OH)(H2O)(TMP)] (TPP = dianion of meso-tetraphenylporphine; TMP = dianion of meso-tetramesitylporphine). Each of the compounds has been fully characterized in solution and the solid state. The stability of the silanethiolate complexes versus other iron(III) porphyrinate complexes ...[more]

PMID: 24138018

Similar Datasets

Bis(cyano) Iron(III) Porphyrinates: What Is the Ground State?

Project description:The synthesis of six new bis(cyano) iron(III) porphyrinate derivatives is reported. The anionic porphyrin complexes utilized tetraphenylporphyrin, tetramesitylporphyrin, and tetratolylporphyrin as the porphyrin ligand. The potassium salts of Kryptofix-222 and 18-C-6 were used as the cations. These complexes have been characterized by X-ray structure analysis, solid-state Mössbauer spectroscopy, and EPR spectroscopy, both in frozen CH2Cl2 solution and in the microcrystalline state. These data show that these anionic complexes can exist in either the (dxz,dyz)(4)(dxy)(1) or the (dxy)(2)(dxz,dyz)(3) electronic configuration and some can clearly readily interconvert. This is a reflection that these two states can be very close in energy. In addition to the effects of varying the porphyrin ligand, subtle effects of the cyanide ligand environment in the solid state and in solution are sufficient to shift the balance between the two electronic states.

| S-EPMC4608243 | biostudies-literature

Comparison of cyanide and carbon monoxide as ligands in iron(II) porphyrinates.

Project description:Spot the difference: The five-coordinate iron(II) cyanoporphyrinates, which are spin-crossover compounds, can be used to synthesize previously unknown six-coordinate complexes. Bis(cyano) and (cyano)imidazole complexes are presented, and the five- and six-coordinate (cyano)iron(II) derivatives are compared with analogous CO complexes.

| S-EPMC2893548 | biostudies-literature

New insights on the electronic and molecular structure of cyanide-ligated iron(III) porphyrinates.

Project description:The preparation and characterization of several new cyano-ligated six-coordinate low-spin iron(III) porphyrinates are reported. The synthesis and structure of the new bis(cyanide) derivative K(222)][Fe(TMP)(CN)2] (TMP = tetramesitylporphyrinate) is described. Three mixed-ligand species of the general form [Fe(Porph)(CN)(L)], where L = 1-methylimidazole or pyridine, have also been prepared and structurally characterized. All complexes have been studied with EPR spectroscopy in frozen solution and in microcrystalline form. In some cases, especially those of the bis(cyanide) derivative above and the previously reported [Fe(TPP)(CN)2](-), there are significant differences in the EPR spectra as a result of the state change. These spectral differences can be correlated with changes in the electron configuration that are the likely result of a differing environment of the coordinated cyanide ligands; the core conformation and electronic structure of the porphyrin ligand are unlikely to play a role. All four new complexes and [Fe(TPP)(CN)2](-) have been studied by Mössbauer spectroscopy with variable-temperature and applied magnetic-field measurements. The sign of the quadrupole splitting value has been established as negative. These measurements have allowed us to give estimates of the energy difference between the two close-lying dpi (dxz and dyz) orbitals. These splitting values range from approximately 267 cm-1 for [Fe(TPP)(CN)2](-) to approximately 614 cm(-1) for [Fe(TPP)(CN)(Py)].

| S-EPMC2532704 | biostudies-literature

Hydrosulfide (HS-) coordination in iron porphyrinates.

Project description:Recent reports of potential physiological roles of hydrogen sulfide have prompted interest in heme-sulfide interactions. Heme-H(2)S and/or heme-HS(-) interactions could potentially occur during endogenous production, transport, signaling events, and catabolism of H(2)S. We have investigated the interaction of the hydrosulfide ion (HS(-)) with iron porphyrinates. UV-vis spectral studies show the formation of [Fe(Por)(SH)](-), [Fe(Por)(SH)(2)](2-), and the mixed-ligand species [Fe(Por)(Im)(SH)](-). UV-vis binding studies of [Fe(OEP)] and [Fe(T-p-OMePP)] (OEP = octaethylporphyrinate; T-p-OMePP = tetra-p-methoxyphenylporphyrinate) with HS(-) allowed for calculation of the formation constants and extinction coefficients of mono- and bis-HS(-) complexes. We report the synthesis of the first HS(-)-bound iron(II) porphyrin compounds, [Na(222)][Fe(OEP)(SH)].0.5C(6)H(6) and [Na(222)][Fe(T-p-OMePP)(SH)].C(6)H(5)Cl (222 = Kryptofix-222). Characterization by single-crystal X-ray analysis, mass spectrometry, and Mossbauer and IR spectroscopy is all consistent with that of known sulfur-bound high-spin iron(II) compounds. The Fe-S distances of 2.3929(5) and 2.3887(13) A are longer than all reported values of [Fe(II)(Por)(SR)](-) species. An analysis of the porphyrin nonplanarity for these derivatives and for all five-coordinate high-spin iron(II) porphyrinate derivatives with an axial anion ligand is presented. In our hands, attempts to synthesize iron(III) HS(-) derivatives led to iron(II) species.

| S-EPMC2811220 | biostudies-literature

Structural and Physical Characterization of (Nitrato)iron(III) Porphyrinates [Fe(por)(NO(3))] - Variable Coordination of Nitrate.

Project description:We report the X-ray crystal structures of two different iron(III) porphyrinates: [Fe(OEP)(NO(3))] and [Fe(TPP)(NO(3))]. The first complex has the nitrate ion coordinated by a single oxygen atom while the second derivative has the nitrate coordinated in a symmetric bidentate fashion. This latter structure is a redetermination that shows some differences from an earlier structure; the difference appears to be the result of an unrecognized nitrate ion disorder in the earlier structure determination. Changes in physical properties of three species ([Fe(TPivP)(NO(3))], [Fe(OEP)(NO(3))], and [Fe(TPP)(NO(3))] as a function of coordination mode were examined by Mössbauer and EPR spectroscopies; EPR spectra appear to be most sensitive to the change in coordination mode.

| S-EPMC2151737 | biostudies-literature

Anisotropic iron motion in nitrosyl iron porphyrinates: natural and synthetic hemes.

Project description:The vibrational spectra of two five-coordinate nitrosyl iron porphyrinates, [Fe(OEP)(NO)] (OEP = dianion of 2,3,7,8,12,13,17,18-octaethylporphyrin) and [Fe(DPIX)(NO)] (DPIX = deuteroporphyrin IX), have been studied by oriented single-crystal nuclear resonance vibrational spectroscopy. Single crystals (both are in the triclinic crystal system) were oriented to give vibrational spectra perpendicular to the porphyrin plane. Additionally, two orthogonal in-plane measurements that were also either perpendicular or parallel to the projection of the FeNO plane onto the porphyrin plane yield the complete set of vibrations with iron motion. In addition to cleanly enabling the assignment of the FeNO bending and stretching modes, the measurements reveal that the two in-plane spectra from the parallel and perpendicular in-plane directions for both compounds have substantial differences. The assignment of these in-plane vibrations were aided by density functional theory predictions. The differences in the two in-plane directions result from the strongly bonded axial NO ligand. The direction of the in-plane iron motion is thus found to be largely parallel and perpendicular to the projection of the FeNO plane on the porphyrin plane. These axial ligand effects on the in-plane iron motion are related to the strength of the axial ligand-to-iron bond.

| S-EPMC3993889 | biostudies-literature

Iron nitrosyl "natural" porphyrinates: does the porphyrin matter?

Project description:The synthesis and spectroscopic characterization of three five-coordinate nitrosyliron(II) complexes, [Fe(Porph)(NO)], are reported. These three nitrosyl derivatives, where Porph represents protoporphyrin IX dimethyl ester, mesoporphyrin IX dimethyl ester, or deuteroporphyrin IX dimethyl ester, display notable differences in their properties relative to the symmetrical synthetic porphyrins such as OEP and TPP. The N-O stretching frequencies are in the range of 1651-1660 cm(-1), frequencies that are lower than those of synthetic porphyrin derivatives. Mössbauer spectra obtained in both zero and applied magnetic field show that the quadrupole splitting values are slightly larger than those of known synthetic porphyrins. The electronic structures of these naturally occurring porphyrin derivatives are thus seen to be consistently different from those of the synthetic derivatives, the presumed consequence of the asymmetric peripheral substituent pattern. The molecular structure of [Fe(PPIX-DME)(NO)] has been determined by X-ray crystallography. Although disorder of the axial nitrosyl ligand limits the structural quality, this derivative appears to show the same subtle structural features as previously characterized five-coordinate nitrosyls.

| S-EPMC3993899 | biostudies-literature

Proton-mediated electron configuration change in high-spin iron(II) porphyrinates.

Project description:The synthesis, molecular structure, and electronic structure characterization of two five-coordinate high-spin imidazolate-ligated iron(II) porphyrinates are reported. Their electronic structure, as deduced from Mössbauer spectra obtained in strong magnetic fields, is distinctly different from that of the analogous imidazole-ligated species. The resulting electronic structure models are consistent with all observed differing features in the two classes.

| S-EPMC1479300 | biostudies-literature

Four-coordinate iron(II) porphyrinates: electronic configuration change by intermolecular interaction.

Project description:The syntheses and structures of three four-coordinate iron(II) porphyrinates are reported. The three derivatives are tetraarylporphyrin species, where the aryl is either phenyl, p-methylphenyl, or p-methoxyphenyl. One of these derivatives, that of tetraphenylporphyrin, Fe(TPP), is a new crystalline phase that is distinct from the earlier reported phase (Collman, J. P.; et al. J. Am. Chem. Soc. 1975, 97, 2676). This new phase of Fe(TPP) has a very saddled porphyrin core; the prior phase was ruffled. The iron atom has close interactions (approximately 3.10 A) with two pyrrole Cb-Cb bonds above and below the porphyrin plane. Mössbauer spectra and magnetic susceptibility measurements, different for the two phases, provide strong evidence that the two phases of Fe(TPP) have distinct electronic structures that originate from intermolecular interactions.

| S-EPMC2515358 | biostudies-literature

Nuclear resonance vibrational spectra of five-coordinate imidazole-ligated iron(II) porphyrinates.

Project description:Nuclear resonance vibrational spectra have been obtained for six five-coordinate imidazole-ligated iron(II) porphyrinates, [Fe(Por)(L)] (Por = tetraphenylporphyrinate, octaethylporphyrinate, tetratolylporphyrinate, or protoporphyrinate IX and L = 2-methylimidazole or 1,2-dimethylimidazole). Measurements have been made on both powder and oriented crystal samples. The spectra are dominated by strong signals around 200-300 cm(-1). Although the in-plane and out-of-plane vibrations are seriously overlapped, oriented crystal spectra allow their deconvolution. Thus, oriented crystal experimental data, along with density functional theory (DFT) calculations, enable the assignment of key vibrations in the spectra. Molecular dynamics are also discussed. The nature of the Fe-N(Im) vibrations has been elaborated further than was possible from resonance Raman studies. Our study suggests that the Fe motions are coupled with the porphyrin core and peripheral groups motions. Both peripheral groups and their conformations have significant influence on the vibrational spectra (position and shape).

| S-EPMC3273671 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data