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Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index.


ABSTRACT: Recent genetic association studies have identified 55 genetic loci associated with obesity or body mass index (BMI). The vast majority, 51 loci, however, were identified in European-ancestry populations. We conducted a meta-analysis of associations between BMI and ?2.5 million genotyped or imputed single nucleotide polymorphisms among 86 757 individuals of Asian ancestry, followed by in silico and de novo replication among 7488-47 352 additional Asian-ancestry individuals. We identified four novel BMI-associated loci near the KCNQ1 (rs2237892, P = 9.29 × 10(-13)), ALDH2/MYL2 (rs671, P = 3.40 × 10(-11); rs12229654, P = 4.56 × 10(-9)), ITIH4 (rs2535633, P = 1.77 × 10(-10)) and NT5C2 (rs11191580, P = 3.83 × 10(-8)) genes. The association of BMI with rs2237892, rs671 and rs12229654 was significantly stronger among men than among women. Of the 51 BMI-associated loci initially identified in European-ancestry populations, we confirmed eight loci at the genome-wide significance level (P < 5.0 × 10(-8)) and an additional 14 at P < 1.0 × 10(-3) with the same direction of effect as reported previously. Findings from this analysis expand our knowledge of the genetic basis of obesity.

SUBMITTER: Wen W 

PROVIDER: S-EPMC4168820 | biostudies-literature | 2014 Oct

REPOSITORIES: biostudies-literature

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Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index.

Wen Wanqing W   Zheng Wei W   Okada Yukinori Y   Takeuchi Fumihiko F   Tabara Yasuharu Y   Hwang Joo-Yeon JY   Dorajoo Rajkumar R   Li Huaixing H   Tsai Fuu-Jen FJ   Yang Xiaobo X   He Jiang J   Wu Ying Y   He Meian M   Zhang Yi Y   Liang Jun J   Guo Xiuqing X   Sheu Wayne Huey-Herng WH   Delahanty Ryan R   Guo Xingyi X   Kubo Michiaki M   Yamamoto Ken K   Ohkubo Takayoshi T   Go Min Jin MJ   Liu Jian Jun JJ   Gan Wei W   Chen Ching-Chu CC   Gao Yong Y   Li Shengxu S   Lee Nanette R NR   Wu Chen C   Zhou Xueya X   Song Huaidong H   Yao Jie J   Lee I-Te IT   Long Jirong J   Tsunoda Tatsuhiko T   Akiyama Koichi K   Takashima Naoyuki N   Cho Yoon Shin YS   Ong Rick Th RT   Lu Ling L   Chen Chien-Hsiun CH   Tan Aihua A   Rice Treva K TK   Adair Linda S LS   Gui Lixuan L   Allison Matthew M   Lee Wen-Jane WJ   Cai Qiuyin Q   Isomura Minoru M   Umemura Satoshi S   Kim Young Jin YJ   Seielstad Mark M   Hixson James J   Xiang Yong-Bing YB   Isono Masato M   Kim Bong-Jo BJ   Sim Xueling X   Lu Wei W   Nabika Toru T   Lee Juyoung J   Lim Wei-Yen WY   Gao Yu-Tang YT   Takayanagi Ryoichi R   Kang Dae-Hee DH   Wong Tien Yin TY   Hsiung Chao Agnes CA   Wu I-Chien IC   Juang Jyh-Ming Jimmy JM   Shi Jiajun J   Choi Bo Youl BY   Aung Tin T   Hu Frank F   Kim Mi Kyung MK   Lim Wei Yen WY   Wang Tzung-Dao TD   Shin Min-Ho MH   Lee Jeannette J   Ji Bu-Tian BT   Lee Young-Hoon YH   Young Terri L TL   Shin Dong Hoon DH   Chun Byung-Yeol BY   Cho Myeong-Chan MC   Han Bok-Ghee BG   Hwu Chii-Min CM   Assimes Themistocles L TL   Absher Devin D   Yan Xiaofei X   Kim Eric E   Kuo Jane Z JZ   Kwon Soonil S   Taylor Kent D KD   Chen Yii-Der I YD   Rotter Jerome I JI   Qi Lu L   Zhu Dingliang D   Wu Tangchun T   Mohlke Karen L KL   Gu Dongfeng D   Mo Zengnan Z   Wu Jer-Yuarn JY   Lin Xu X   Miki Tetsuro T   Tai E Shyong ES   Lee Jong-Young JY   Kato Norihiro N   Shu Xiao-Ou XO   Tanaka Toshihiro T  

Human molecular genetics 20140526 20


Recent genetic association studies have identified 55 genetic loci associated with obesity or body mass index (BMI). The vast majority, 51 loci, however, were identified in European-ancestry populations. We conducted a meta-analysis of associations between BMI and ∼2.5 million genotyped or imputed single nucleotide polymorphisms among 86 757 individuals of Asian ancestry, followed by in silico and de novo replication among 7488-47 352 additional Asian-ancestry individuals. We identified four nov  ...[more]

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