Unknown

Dataset Information

0

Proteomic Characterization Reveals That MMP-3 Correlates With Bronchiolitis Obliterans Syndrome Following Allogeneic Hematopoietic Cell and Lung Transplantation.


ABSTRACT: Improved diagnostic methods are needed for bronchiolitis obliterans syndrome (BOS), a serious complication after allogeneic hematopoietic cell transplantation (HCT) and lung transplantation. For protein candidate discovery, we compared plasma pools from HCT transplantation recipients with BOS at onset (n = 12), pulmonary infection (n = 16), chronic graft-versus-host disease without pulmonary involvement (n = 15) and no chronic complications after HCT (n = 15). Pools were labeled with different tags (isobaric tags for relative and absolute quantification), and two software tools identified differentially expressed proteins (?1.5-fold change). Candidate proteins were further selected using a six-step computational biology approach. The diagnostic value of the lead candidate, matrix metalloproteinase 3 (MMP3), was evaluated by enzyme-linked immunosorbent assay in plasma of a verification cohort (n = 112) with and without BOS following HCT (n = 76) or lung transplantation (n = 36). MMP3 plasma concentrations differed significantly between patients with and without BOS (area under the receiver operating characteristic curve 0.77). Consequently, MMP3 represents a potential noninvasive blood test for diagnosis of BOS.

SUBMITTER: Liu X 

PROVIDER: S-EPMC4956556 | biostudies-literature | 2016 Aug

REPOSITORIES: biostudies-literature

altmetric image

Publications

Proteomic Characterization Reveals That MMP-3 Correlates With Bronchiolitis Obliterans Syndrome Following Allogeneic Hematopoietic Cell and Lung Transplantation.

Liu X X   Yue Z Z   Yu J J   Daguindau E E   Kushekhar K K   Zhang Q Q   Ogata Y Y   Gafken P R PR   Inamoto Y Y   Gracon A A   Wilkes D S DS   Hansen J A JA   Lee S J SJ   Chen J Y JY   Paczesny S S  

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons 20160314 8


Improved diagnostic methods are needed for bronchiolitis obliterans syndrome (BOS), a serious complication after allogeneic hematopoietic cell transplantation (HCT) and lung transplantation. For protein candidate discovery, we compared plasma pools from HCT transplantation recipients with BOS at onset (n = 12), pulmonary infection (n = 16), chronic graft-versus-host disease without pulmonary involvement (n = 15) and no chronic complications after HCT (n = 15). Pools were labeled with different t  ...[more]

Similar Datasets

| S-EPMC3061253 | biostudies-literature
| S-EPMC8403632 | biostudies-literature
| S-EPMC7091913 | biostudies-literature
| S-EPMC5270387 | biostudies-literature
| S-EPMC9081205 | biostudies-literature
| S-EPMC8745215 | biostudies-literature
| S-EPMC4163140 | biostudies-literature
| S-EPMC4801753 | biostudies-literature
| S-EPMC10510238 | biostudies-literature
| S-EPMC7228625 | biostudies-literature