Browse
Submit Data
Databases
API
Help

Dataset Information

25 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Amphirosellinia nigrospora JS-1675, an Endophytic Fungus from Pteris cretica.

ABSTRACT: The fungus Amphirosellinia nigrospora strain JS-1675 has been reported to exert antimicrobial effects against various plant-pathogenic bacteria and fungi. Here, we report the draft genome sequence of A. nigrospora for the first time. The assembly comprises 48,177,783?bp with 18 scaffolds.

SUBMITTER: Jeon J

PROVIDER: S-EPMC6522779 | biostudies-literature | 2019 May

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Amphirosellinia nigrospora JS-1675, an Endophytic Fungus from Pteris cretica.

Jeon Jongbum J Park Sook-Young SY Kim Jung A JA Yu Nan Hee NH Park Ae Ran AR Kim Jin-Cheol JC Lee Yong-Hwan YH Kim Soonok S

Microbiology resource announcements 20190516 20

The fungus Amphirosellinia nigrospora strain JS-1675 has been reported to exert antimicrobial effects against various plant-pathogenic bacteria and fungi. Here, we report the draft genome sequence of A. nigrospora for the first time. The assembly comprises 48,177,783 bp with 18 scaffolds. ...[more]

PMID: 31097494

Similar Datasets

Draft Genome Sequence of an Endophytic Fungus, Gaeumannomyces sp. Strain JS-464, Isolated from a Reed Plant, Phragmites communis.

Project description:An endophytic fungus, Gaeumannomyces sp. strain JS-464, is capable of producing a number of secondary metabolites which showed significant nitric oxide reduction activity. The draft genome assembly has a size of 53,151,282 bp, with a G+C content of 53.11% consisting of 80 scaffolds with an N50 of 7.46 Mbp.

| S-EPMC5543644 | biostudies-other

Draft Genome Sequence of Daldinia childiae JS-1345, an Endophytic Fungus Isolated from Stem Tissue of Korean Fir.

Project description:The fungus Daldinia childiae strain JS-1345, isolated from stem tissue of Abies koreana (Korean fir), has shown strong anti-inflammatory activity. Here, we report the genome sequence of D. childiae JS-1345. The final assembly consisted of 133 scaffolds totaling 38,652,569 bp (G+C content, 44.07%).

| S-EPMC7118187 | biostudies-literature

Draft Genome Sequence of Diaporthe sp. Strain HANT25, an Endophytic Fungus Producing Mycoepoxydiene.

Project description:Diaporthe sp. strain HANT25 is an endophytic fungus that produces mycoepoxydiene, a rare bioactive natural compound. Here, we report the genome sequence of Diaporthe sp. HANT25, comprising 55.3 Mb in 80 scaffolds. The genome sequence should enhance understanding of the biology and bioactive compound production potential of the genus Diaporthe.

| S-EPMC7471384 | biostudies-literature

Nigrosphaerin A a new isochromene derivative from the endophytic fungus Nigrospora sphaerica.

Project description:Nigrosphaerin A, a new isochromene derivative (1), was isolated from the endophytic fungus Nigrospora sphaerica and chemically identified as 3-(3,4-dihydroxyphenyl)-4,6,8-trihydroxy-1H-isochromen-1-one-6-O-?-d-glucopyranoside. In addition nineteen known compounds (2-20) were isolated from the same fungus and chemically identified. Compounds (1-3, 5, and 7-16) were isolated for the first time from this fungus. In vitro antileukemic, antileishmanial, antifungal, antibacterial and antimalarial activities of (1-20) were examined. Compounds 5, 7, 9 and 10 showed good antileukemic activity against HL60 cells with IC50 values of 0.03, 0.39, 0.2 and 0.4 ?g/mL, respectively and against K562 cells with IC50 values of 0.35, 0.35, 0.49 and 0.01 ?g/mL, respectively. Compounds 3, 4 and 6 showed moderate antileishmanial activity with IC50 values of 30.2, 26.4 and 36.4 ?g/ml, respectively. Compound 7 showed moderate antifungal activity against Cryptococcus neoformans with IC50 value of 14.8 ?g/mL.

| S-EPMC5047436 | biostudies-literature

Four New Pterosins from Pteris cretica and Their Cytotoxic Activities.

Project description:Phytochemical investigation of the aerial parts of Pteris cretica led to the isolation and elucidation of nine pterosins, including four new pterosins, creticolacton A (1), 13-hydroxy-2(R),3(R)-pterosin L (2), creticoside A (3), and spelosin 3-O-β-d-glucopyranoside (4), together with five known pterosins 5-9. Their structures were identified mainly on the basis of 1D and 2D NMR spectral data, ESI-MS and literature comparisons. Compounds 1 and 3 were new type of petrosins with a six membered ring between C-14 and C-15. The new compounds were tested in vitro for their cytotoxic activities against four human tumor cell lines (SH-SY5Y, SGC-7901, HCT-116, Lovo). Results showed that compounds 1 and 2 exhibited cytotoxic activity against HCT-116 cells with IC50 value of 22.4 μM and 15.8 μM, respectively.

| S-EPMC6696042 | biostudies-literature

Draft genome sequence of endophytic fungus Talaromyces purpureogenus strain YAFEF302, isolated from Juglans sigillata.

Project description:Here, we report a draft genome sequence of endophytic fungus Talaromyces purpureogenus strain YAFEF302, isolated from Juglans sigillata. The genome resource will support future research into potential secondary metabolite diversity of this fungus.

| S-EPMC10793358 | biostudies-literature

Draft genome sequence of the endophytic fungus Phoma sp. strain YAFEF320, isolated from Gerbera jamesonii.

Project description:Here, we report a draft genome sequence of endophytic fungus Phoma sp. strain YAFEF320, isolated from the roots of Gerbera jamesonii. The genome size of Phoma sp. YAFEF320 was 32,542,820 bp with 52.08% GC content. The genome resource will support future research into potential secondary metabolite diversity of this fungus.

| S-EPMC10793338 | biostudies-literature

Draft Genome Sequence of the Fungus Penicillium brasilianum MG11.

Project description:The genus Penicillium belongs to the phylum Ascomycota and includes a variety of fungal species important for food and drug production. We report the draft genome sequence of Penicillium brasilianum MG11. This strain was isolated from soil, and it was reported to produce different secondary metabolites.

| S-EPMC4559720 | biostudies-literature

Draft Genome Sequence of Fungus Clonostachys rosea Strain YKD0085.

Project description:Here, we report the draft genome sequence of Clonostachys rosea (strain YKD0085). The functional annotation of C. rosea provides important information related to its ability to produce secondary metabolites. The genome sequence presented here builds the basis for further genome mining.

| S-EPMC4919396 | biostudies-literature

Draft Genome Sequence of the Lichenized Fungus Bacidia gigantensis.

Project description:The draft genome sequence of Bacidia gigantensis, a lichenized fungus in the order Lecanorales, was sequenced directly from a herbarium specimen collected from the type locality at Sleeping Giant Provincial Park in Ontario, Canada. Using long-read sequencing on the Oxford Nanopore PromethION platform, we assembled a nearly complete genome sequence.

| S-EPMC8567793 | biostudies-literature