Project description:This SuperSeries is composed of the SubSeries listed below. Each of the SubSeries contained in this SuperSeries represents identical RNA samples used for hybridization to different array platforms. Refer to individual Series
Project description:To underly the potential downstream transcriptional regulation of HPIP that could account for cartilage and skeletal development. RNA-seq analysis were performed in HPIP knockout and control primary chondrocytes.Among the 1271 significantly differentially expressed genes, transcripts for 486 (7%) of them were upregulated while transcripts for 785 (11%) were downregulated in HPIP knockout chondrocytes compared to the controls. We found HPIP was closely correlated with the cartilage development.
Project description:To assess the direct downstream targets of HPIP, a genome-wide ChIP-seq profiling was performed. The ChIP-seq data was examined by the quality evaluation. The results demonstrated that of significant ChIP-seq peaks for HPIP, 59% of them occurred at intronic and intergenic sites We found HPIP was closely correlated with the cartilage development.