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Intragenic recruitment of NF-kB drives splicing modifications upon activation by the oncogene Tax of HTLV-1

ABSTRACT: Chronic NF-kB activation in inflammation and cancer has long been linked to persistent activation of NF-kB–responsive gene promoters. However, NF-kB factors also massively bind to gene bodies. Here, we demonstrate that recruitment of the NF-kB factor RELA to intragenic regions regulates alternative splicing upon NF-kB activation by the viral oncogene Tax of HTLV-1. Integrative analyses of RNA splicing and chromatin occupancy, combined with chromatin tethering assays, demonstrate that DNA-bound RELA interacts with and recruits the splicing regulator DDX17, in an NF-kB activation–dependent manner. This leads to alternative splicing of target exons due to the RNA helicase activity of DDX17. Similar results were obtained upon Tax-independent NF-kB activation, indicating that Tax likely exacerbates a physiological process where RELA provides splice target specificity. Collectively, our results demonstrate a physical and direct involvement of NF-kB in alternative splicing regulation, which significantly revisits our knowledge of HTLV-1 pathogenesis and other NF-kB–related diseases.

ORGANISM(S): Homo sapiens

PROVIDER: GSE123752 | GEO | 2020/05/12

REPOSITORIES: GEO

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Intragenic recruitment of NF-kB drives splicing modifications upon activation by the oncogene Tax of HTLV-1

Project description:Intragenic recruitment of NF-kB drives splicing modifications upon activation by the oncogene Tax of HTLV-1

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Identification of genes that are regulated by TAK1 in human cutaneous T cell lymphoma HuT-102 cells

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