Transcriptomics

Dataset Information

0

TWAS-based translational genomics approach identifies IL10RB as the top candidate gene for COVID-19 host susceptibility and severity


ABSTRACT: Recent efforts have identified genetic loci that are associated with coronavirus disease 2019 (COVID-19) infection rates and disease outcome severity. Translating these genetic findings into druggable genes that regulate COVID-19 host susceptibility is a critical next step. Using a translational genomics approach that integrates COVID-19 genetic susceptibility variants, multi-tissue genetically regulated gene expression (GReX) and perturbagen signatures, we identify IL10RB as the top key regulator of COVID-19 host susceptibility. In a series of validation steps we show that predicted GReX up-regulation of IL10RB and higher IL10RB expression in COVID-19 patient blood is associated with worse COVID-19 outcomes, and that in vitro IL10RB overexpression is associated with increased viral load and activation of disease-relevant molecular pathways.

ORGANISM(S): Homo sapiens

PROVIDER: GSE180622 | GEO | 2022/07/22

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

| PRJNA748962 | ENA
2022-07-19 | E-MTAB-10926 | biostudies-arrayexpress
2024-06-16 | PXD046103 | Pride
2023-03-02 | GSE221066 | GEO
2023-03-02 | GSE221065 | GEO
2022-05-03 | GSE201790 | GEO
2024-08-14 | GSE210432 | GEO
2024-08-14 | GSE210433 | GEO
2022-03-01 | E-MTAB-10970 | biostudies-arrayexpress
2022-12-18 | GSE221234 | GEO