Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Profiling of H3K9cr and H3K9ac in the P19 embryonal carcinoma cells

ABSTRACT: To gain a deeper insight into dynamic changes of H3K9cr and H3K9ac during cell fate commitment, ChIP-seq was performed to analyze the genome-wide changes of H3K9cr and H3K9ac during neuroectodermal differentiation of the P19 embryonal carcinoma cells.

ORGANISM(S): Mus musculus

PROVIDER: GSE200519 | GEO | 2022/04/17

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Profiling of H3K9cr and H3K9ac in the P19 embryonal carcinoma cells

Project description:Profiling of H3K9cr and H3K9ac in the P19 embryonal carcinoma cells

| PRJNA824866 | ENA

Dynamic profiling of histone Kcr and Kla during neural differentiation in P19 embryonal carcinoma cells

Project description:To gain a deeper insight into dynamic changes of histone lysine crotonylation and lactylation during embryonic neurogenesis, ChIP-seq, ATAC-seq and RNA-seq were performed to analyze the genome-wide changes of histone Kcr and Kla in the P19 embryonal carcinoma cells.

2022-06-30 | GSE171832 | GEO

P19-atRA-kinetics

Project description:P19 embryonal carcinoma cells were treated with 1µM all trans retinoic acid and total RNA was collected at different time points

2013-06-30 | E-MEXP-3669 | biostudies-arrayexpress

Distribution of chromatin features in mouse P19 embryonal carcinoma cells

Project description:Distribution of chromatin features in mouse P19 embryonal carcinoma cells

| PRJNA484121 | ENA

Distribution of chromatin features in mouse P19 embryonal carcinoma cells

Project description:CHIP to investigate Hmgn2 binding in P19 undifferentiated and differentiated neuronal cells.

2018-08-03 | GSE118031 | GEO

eCLIP of mouse Asterix/Gtsf1 transfected in mouse P19 embryonal teratoma cells

Project description:eCLIP of mouse Asterix/Gtsf1 transfected in mouse P19 embryonal teratoma cells

| PRJNA634751 | ENA

Differential expression of glycosyltransferases in P19 mouse embryonal carcinoma cells with or without differentiation by retinoic acid

Project description:The project is aimed at understanding the role of the Lex-containing L5 carbohydrate epitope in the developmental process of neural induction. We plan to identify 1) the protein to which the L5 glycan is attached, 2) glycosyltransferases upregulated during neural induction, 3) the corresponding L5 carbohydrate binding protein (CBP), 4) the mechanism of interaction between L5 and its CBP, and 5) the spatiotemporal regulation of L5 and L5-CBP expression during neural induction. There is evidence, by Westernblot and immunofluorescence, that the expression of the Lewis-x-like L5 carbohydrate epitope shows dramatic differences in expression between undifferentiated cells and cells differentiated with retinoic acid. We wish to know which enzyme(s) involved in the biosynthetic pathway may be up/downregulated under these experimental conditions. Two classes of p19 mouse embryonal carcinoma cell RNA were analyzed: undifferentiated and differentiated with retinotic acid. Classes were prepared in triplicate for a total of 6 samples. All samples were hybridized to the custom designed CFG GLYCOv2 glycogene array.

2011-03-02 | E-GEOD-27596 | biostudies-arrayexpress

Gene expression data from undifferentiated mouse embryonal carcinoma cell strains (MOE430A and MOE430B)

Project description:Gene expression profiles of undifferentiated mouse embryonal carcinoma cell strains (P19, P19CL6, and 4 P19CL6 sublines) were obtained, using Affymetrix GeneChip Mouse Genome 430A and 430B. Heart diseases such as cardiac infarction damage cardiomyocytes and consequently lead to significant loss of the contractile capacity of the heart. To repair functions of the injured heart, a great deal of research has attempted to develop regenerative medicine using pluripotent stem cell-based cardiomyocytes as cell therapy products. However, the efficiency of the current methods available for the cardiac differentiation of stem cells is insufficient for clinical settings. A comprehensive understanding of the mechanism involved in the cardiac differentiation of stem cells is necessary to improve the differentiation efficiency. To identify genes assosiated with cardiomyogenic potential, we isolated P19CL6 cell sublines possessing distinct properties in cardiomyogenesis and comprared their transcriptome profiles with those of mouse embryonal carcinoma P19 and P19CL6 cells. Total RNA isolated from undifferentiated EC cell strains (P19 cells, P19CL6 cells, and 4 P19CL6 sublines) using Affymetrix chips MOE430A and MOE430AB. CEL files unavailable.

2011-01-26 | E-GEOD-26875 | biostudies-arrayexpress

Gene expression data from undifferentiated mouse embryonal carcinoma cell strains (MOE430A and MOE430B)

2011-01-26 | GSE26875 | GEO

p19-WT and p19-T111BpyAla treatment of extracted small RNAs

Project description:small RNA fractions were treated with either p19-WT or T111BpyAla to evaluate the catalytic ability of p19-T111BpyAla compared to the WT protein in degrading miRNAs

2023-04-28 | GSE229272 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data