Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Affymetrix PrimeView human gene expression of different cell lines

ABSTRACT: microRNAs are post-transcriptional regulators by degrading the target mRNA. miRNAs can regulate and control a variety of biological processes. We want to use these Affymetrix PrimeView microarrays to find different genes between negative control cells and miR-484 cells.

ORGANISM(S): Homo sapiens

PROVIDER: GSE66844 | GEO | 2015/03/14

SECONDARY ACCESSION(S): PRJNA278154

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Role of BAP1 in pancreatic cancer (PrimeView)

Project description:Role of BAP1 in pancreatic cancer (PrimeView)

| PRJNA491699 | ENA

Expression data from PrimeView human gene expression array

Project description:Expression data from PrimeView human gene expression array

| PRJNA767681 | ENA

Expression data from PrimeView human gene expression array

Project description:Expression data from PrimeView human gene expression array

| PRJNA811773 | ENA

Expression data from PrimeView human gene expression array

Project description:Expression data from PrimeView human gene expression array

| PRJNA1050163 | ENA

Expression data from PrimeView human gene expression array

Project description:Gene expression in A498 cells infected with shCtrl and shMCM8 was detected with a PrimeView human gene expression array. We performed Affymetrix Human Gene Chip Prime View analysis on shCtrl and shMCM8 A498 cells. Of the 2415 differentially expressed genes (DEGs) found in shMCM8 and shCtrl A498 cells, 1263 were up-regulated and 1152 were down-regulated based on the threshold of absolute fold change ≥ 2 and FDR < 0.05

2022-03-03 | GSE197734 | GEO

Expression data from PrimeView human gene expression array

Project description:Gene expression in HCT-116 cells infected with shCtrl and shRFWD3 was detected with a PrimeView human gene expression array. We performed Affymetrix Human Gene Chip Prime View analysis on shCtrl and shRFWD3 HCT 116 cells. Of the 1305 differentially expressed genes (DEGs) found in shRFWD3 and shCtrl HCT 116 cells, 629 were up-regulated and 676 were down-regulated based on the threshold of absolute fold change ≥ 2 and FDR < 0.05

2021-10-01 | GSE185122 | GEO

Expression data from PrimeView human gene expression array

Project description:Gene expression in CAL-27 cells infected with shCtrl and shSCUBE3 was detected with a PrimeView human gene expression array. We performed Affymetrix Human Gene Chip Prime View analysis on shCtrl and shSCUBE3 CAL-27 cells. Of the 931 differentially expressed genes (DEGs) found in shCtrl and shSCUBE3 CAL-27 cells, 353 were up-regulated and 578 were down-regulated based on the threshold of absolute fold change ≥ 1.3 and FDR < 0.05

2024-12-12 | GSE249671 | GEO

Gene expression profiles of PTPRZ1-knocking-down human glioblastoma stem cells [PrimeView]

Project description:Glioblastoma stem cells (GSCs), are at the apex of its cellular hierarchy and contribute to glioblastoma progression and tumor recurrence. Gene expression profiling is useful in determining the genome-wide gene expression changes based on the experimental purpose. In order to interrogate the downstream targets of PTPRZ1, we applied gene expression profiling approach to screen the altered genes that are responsible for the functional phenotype changes. The results will provide a cue for mechanical analysis with potential translational values. PTPRZ1-knocking down glioblastoma stem cells (GSCs) and control GSCs were used in this study. RNA were isolated using Primescript RT Master Mix (Takara). Profiling was established by applying PrimeView Affymetrix Human Gene Expression Array.

2015-05-21 | E-GEOD-68995 | biostudies-arrayexpress

Circular RNA hsa_circ_0064559 is identified to affect the progression of colorectal cancer [PrimeView]

Project description:A series of circular RNAs (circRNAs) play a pivotal role in the pathogenesis of CRC.We found that hsa_circ_0064559 knockdown had the most significant reduction in the proliferation of CRC cells. The expressed genes(DEGs) between shEV group (n=3) and shCIRC group (n=3) from RKO cells were analyzed on Affymetrix GeneChip primeview human gene expression array (Affymetrix, CA, USA).

2023-06-14 | GSE226489 | GEO

Comparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix HuEx 1.0)

Project description:Comparison between cell lines from 9 different cancer tissue of origin types (Breast, Central Nervous System, Colon, Leukemia, Melanoma, Non-Small Cell Lung, Ovarian, Prostate, Renal) from NCI-60 panel Cell lines from 9 different cancer tissue of origin types

| S-ECPF-GEOD-29682 | biostudies-other

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data