Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Plexin-B2-bound proteins purified by immunoprecipitation using anti-Plexin-B2 antibody

ABSTRACT: To identify Plexin-B2-associated proteins, articular chondrocytes were untreated or treated with Sema4D. Plexin-B2-bound proteins were purified by immunoprecipitation using an anti-Plexin-B2 antibody, followed by mass spectrometry.

ORGANISM(S): Mus Musculus (mouse)

SUBMITTER: Tomohiko Murakami

PROVIDER: PXD034551 | JPOST Repository | Tue Nov 01 00:00:00 GMT 2022

REPOSITORIES: jPOST

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	170813_Murakami_1_1_8u%20(F048677).mzid	Mzid
	170813_Murakami_1_1_8u_170813165253%20(F048678).mzid	Mzid
	170813_Murakami_1_1_8u_170813204533%20(F048679).mzid	Mzid
	170813_Murakami_2_1_8u%20(F048680).mzid	Mzid
	170813_Murakami_2_2_8u%20(F048681).mzid	Mzid

Items per page:

1 - 5 of 7

Similar Datasets

RNA Immunoprecipitation-sequencing from mouse liver using HuR antibody

Project description:We report the HuR-RNA interactions in the liver by performing RNA-immunoprecipitation sequencing (RIP-seq). RIP-seq was performed in healthy livers of wildtype (WT) mice using a HuR antibody. We found that 1380 cytoplasmic-target mRNAs bound to HuR, as assessed by the comparison between the HuR-specific antibody and the IgG control

2021-09-15 | GSE143703 | GEO

RNA immunoprecipitation and sequencing of aminoacyl-tRNA synthetase-specific genes

Project description:To gain insight into the specificity of target mRNAs, we enriched mRNAs bound to TRS by immunoprecipitation with anti-TRS antibody, then performed RNA immunoprecipitation and sequencing (RIP-seq) and compared the mRNAs with those enriched by immunoprecipitation with IgG, anti-AlaRS, anti-PRS and anti-IRS antibodies.

2019-02-05 | GSE120182 | GEO

Identifying METTL5-bound RNA by crosslinking-assisted immunoprecipitation

Project description:Identifying METTL5-bound RNA by crosslinking-assisted immunoprecipitation

| PRJNA729821 | ENA

RNA immunoprecipitation sequencing (RIP seq) using anti-Argonaute2 (Ago2) antibody to identify the potential targets of kshv-miR-K12-1-5p in AC16 cells

Project description:RNA immunoprecipitation sequencing (RIP seq) using anti-Argonaute2 (Ago2) antibody to identify the potential targets of kshv-miR-K12-1-5p in AC16 cells.

2022-04-22 | GSE201041 | GEO

Anti-GCGR antibody treatment in db/db mice

Project description:Gene expression of liver tissue from db/db untreated (6x replicates) and db/db treated with 5mg/kg of 3c7.v44 mAb (6x replicates). Anti-GCGR antibody treatment in db/db mice: fig 2b in Solloway et al.

2015-06-02 | GSE68142 | GEO

polysome-IP profiling experiment : Polysomes of untreated or tunicamycin-treated AC16 cells were immunoprecipitated with anti-MRPS15 antibody, followed by RNA sequencing

Project description:Polysomes of untreated (NT) or tunicamycin-treated (TM) human cardiomyocyte AC16 cells were immunoprecipitated (IP MRPS15) with anti-MRPS15 antibody, followed by RNA sequencing. As a control, RNAseq was performed on polysome-associated RNAs of untreated or tunicamycin-treated human cardiomyocyte AC16 cells before immunoprecipitation (input).

2024-04-01 | E-MTAB-13915 | biostudies-arrayexpress

Transcription profiling of mouse Th1 T cell clone and anergic Th1 T cell clone made anergic by plate-bound anti-CD3 antibody

Project description:compare gene expression profiles between normal and anergic T cells and identify upregulated genes in anergic T cells Experiment Overall Design: RNA from normal Th1 T cell clone and anergic Th1 T cell clone made anergic by plate-bound anti-CD3 antibody were isolated and amplified for microarray analysis

2008-06-14 | E-GEOD-5960 | biostudies-arrayexpress

Role of B cells in generating anti-melanoma immunity in response to anti-PD-L1 antibody therapy

Project description:B cells potentially play a role in the immune response to melanoma, including during treatment with immune modulators. We profiled (transcriptome analysis) effects of anti-PD-L1 antibody therapy on gene expression in B16 melanoma tumors of B cells depleted and WT syngeneic mice. After 7 days of B16 tumors implantation, mice were treated or untreated with anti-PD-L1 antibody (every three days).

2022-05-15 | GSE202879 | GEO

RNA Immunoprecipitation-sequencing from mouse liver using HuR antibody

Project description:RNA Immunoprecipitation-sequencing from mouse liver using HuR antibody

| PRJNA601341 | ENA

Chromatin immunoprecipitation of mouse embryonic kidney tissue and anti-WT1 antibody

Project description:ChIP-chip study using embryonic E18.5 mouse kidney tissue and anti-WT1 antibody (Santa Cruz C19 and N180) performed in three technical replicates. ChIP DNA was not PCR amplified prior to hybridization to Agilent 244K mouse promoter arrays, to avoid potential PCR amplification bias.

2010-06-09 | E-TABM-872 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data