Metabolomics

Dataset Information

0

Urea cycle and 1C/serine metabolism in the prevention of oxygen induced retinopathy


ABSTRACT: Untargeted metabolite profiling links the urea cycle and 1C/serine metabolism in the prevention of oxygen induced retinopathy by hepatic HIF stabilization. Premature infants require oxygen supplementation to survive that is simultaneously toxic to developing tissues. We have demonstrated that hypoxia inducible factor (HIF) stabilization during hyperoxia prevents oxygen induced retinopathy (OIR) and lung disease. Here, untargeted metabolite profiling coupled to XCMS systems biology analysis finds that serine/1C and urea cycles dominate pathway enrichment graphs. MS1 peak areas and MS2 library matches reveal 50% or more increased levels of plasma and retina serine, glycine, hypotaurine, methionine, and taurine. In addition, N-acetylglutamate increased 4-fold in serum, while orotate, citrulline, arginine, aspartate, glutamine were at least 50% increased after HIF stabilization. Targeted data analysis in vivo finds that retinal serine and glycine were derived from liver. HIF-1α2lox/2lox; albumin-cre KO had reduced levels of serine and retinal glycine. Inhibition of 1C metabolism blocked rescue by HIF stabilization. The metabolic phenotype of mice protected from OIR by HIF stabilization is dependent on hepatic serine/1C metabolism and urea cycle.

ORGANISM(S): Mouse Mus Musculus

TISSUE(S): Blood

DISEASE(S): Eye Disease

SUBMITTER: Charandeep Singh  

PROVIDER: ST001130 | MetabolomicsWorkbench | Thu Jan 31 00:00:00 GMT 2019

REPOSITORIES: MetabolomicsWorkbench

Dataset's files

Source:
Action DRS
mwtab Other
Items per page:
1 - 1 of 1

Similar Datasets

2019-07-05 | MTBLS856 | MetaboLights
2020-06-30 | MSV000085654 | GNPS
2016-05-03 | GSE74170 | GEO
2023-12-12 | MSV000093653 | MassIVE
2024-02-16 | GSE248883 | GEO
2022-06-07 | GSE179342 | GEO
2015-12-18 | GSE65966 | GEO
2022-09-27 | PXD033412 | Pride
2022-11-10 | ST002339 | MetabolomicsWorkbench
2021-03-14 | GSE154687 | GEO