ABSTRACT: Mycorrhizal fungal microbial communities from INRA, France, for Deep Transcriptomics studies - Rhyzoscyphus and Meliniomyces - Vaccinium myrtillus metatranscriptome
Project description:Illumina HiSeq2000 technology was used to generate mRNA profiles from Vaccinium myrtillus mycorrhizal and non-mycorrhizal roots with or without Cadmium treatment. 150bp reads were generated and aligned to a Vaccinium myrtillus de novo assembly as reference using CLC Genomics Workbench 8.
Project description:Mycorrhizal fungal microbial communities from INRA, France, for Deep Transcriptomics studies - Oidiodendron maius strain Zn Vaccinium myrtillus metatranscriptome
Project description:Illumina HiSeq2000 technology was used to generate mRNA profiles from Oidiodendron maius free-living mycelium and Vaccinium myrtillus mycorrhizal roots with or without Cadmium treatment. 150bp reads were generated and aligned to the O.maius reference transcripts using CLC Genomics Workbench 8
Project description:Mycorrhizal fungal microbial communities from INRA, France, for Deep Transcriptomics studies - Tulasnella calospora - Serapias vomeracea metatranscriptome
Project description:Mycorrhizal fungal microbial communities from INRA, France, for Deep Transcriptomics studies - Pisolithus microcarpus 441 Eucalyptus globulus metatranscriptome
Project description:Mycorrhizal fungal microbial communities from INRA, France, for Deep Transcriptomics studies - Amanita muscaria MEII Populus tremula x tremuloides metatranscriptome
Project description:Mycorrhizal fungal microbial communities from INRA, France, for Deep Transcriptomics studies - Hebeloma cylindrosporum TV98 IV3 X Pinus pinaster metatranscriptome
Project description:Illumina HiSeq technology was used to generate mRNA profiles from Meliniomyces bicolor mycorrhizal roots compared to free-living mycelium . Mycorrhizal roots and control mycelium were harvested after 113 days and used for RNA extraction. Reads of 150bp were generated and aligned to Meliniomyces bicolor transcripts (https://genome.jgi.doe.gov/Melbi2/Melbi2.home.html) using CLC Genomics Workbench 8.
