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Solanum lycopersicum cultivar:Moneymaker

ABSTRACT: transcriptome, sRNAome and methylome of tomatoes infected by tomato yellow leaf curl virus (TYLCV)

PROVIDER: PRJNA494932 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR7975910_1.fastq.gz	Fastqsanger.gz
	SRR7975910_2.fastq.gz	Fastqsanger.gz
	SRR7975920_1.fastq.gz	Fastqsanger.gz
	SRR7975920_2.fastq.gz	Fastqsanger.gz
	SRR7975930.fastq.gz	Fastqsanger.gz

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Project description:RNA interference (RNAi) is a widely-used approach to generate virus-resistant transgenic crops. However, durability of RNAi-mediated resistance under extreme field conditions and side-effects of stable RNAi expression have not been thoroughly investigated. Here we performed field trials and molecular characterization of two RNAi-transgenic Solanum lycopersicum lines resistant to Tomato yellow leaf curl virus (TYLCV) disease, the major constraint for tomato cultivation in Cuba and worldwide. In order to determine potential impact of the hairpin RNA transgene expression on tomato genome expression and development, differences in the phenotypes and the transcriptome profiles between the transgenic and non-transgenic plants were examined. Transcriptome profiling revealed a common set of up- and down-regulated tomato genes, which correlated with slight developmental abnormalities in both transgenic lines.

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