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Hs_C-HPP_Ramos_Nucleus

ABSTRACT: C-HPP, lymphocytic B-cell line (Ramos), Nucleus

REANALYSIS of: PXD001933

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Others

SUBMITTER: D�ez P, Droste C, D�gano RM, Gonz�lez-Mu�oz M, Ibarrola N, P�rez-Andr�s M, Garin-Muga A, Segura V, Marko-Varga G, LaBaer J, Orfao A, Corrales FJ, De Las Rivas J, Fuentes M

PROVIDER: PAe005388 | PeptideAtlas | 2015-12-31

REPOSITORIES: PeptideAtlas

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Publications

Integration of Proteomics and Transcriptomics Data Sets for the Analysis of a Lymphoma B-Cell Line in the Context of the Chromosome-Centric Human Proteome Project.

Díez Paula P Droste Conrad C Dégano Rosa M RM González-Muñoz María M Ibarrola Nieves N Pérez-Andrés Martín M Garin-Muga Alba A Segura Víctor V Marko-Varga Gyorgy G LaBaer Joshua J Orfao Alberto A Corrales Fernando J FJ De Las Rivas Javier J Fuentes Manuel M

Journal of proteome research 20150805 9

A comprehensive study of the molecular active landscape of human cells can be undertaken to integrate two different but complementary perspectives: transcriptomics, and proteomics. After the genome era, proteomics has emerged as a powerful tool to simultaneously identify and characterize the compendium of thousands of different proteins active in a cell. Thus, the Chromosome-centric Human Proteome Project (C-HPP) is promoting a full characterization of the human proteome combining high-throughpu ...[more]

PMID: 26216070

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Chr16-HPP. Shotgun Analysis improvement. JPR HPP Special issue 2013. Ramos Cell line.

Project description:The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To do this study four human cell lines were selected, MCF7 epithelial cells, CCD18 colon fibroblasts, Ramos and Jurkat B and T lymphocytes respectively. In particular, this subset includes all the data regarding the Ramos cell line. 3 laboratories contributed to compile all the reported data.

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Project description:The Chromosome 16 Consortium is integrated in the Human Proteome Project that aims to develop an entire map of the proteins encoded by the human genome following a gene-centric strategy (C-HPP) to make progress in the understanding of human biology in health and disease (B/D-HPP). To do this study four human cell lines were selected, MCF7 epithelial cells, CCD18 colon fibroblasts, Ramos and Jurkat B and T lymphocytes respectively. In particular, this subset includes all the data regarding the CCD18 cell line. 6 laboratories contributed to compile all the reported data.

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