Proteomics

Dataset Information

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Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis


ABSTRACT: Study on proteins secreted by C. pinesis upon growth on mannan substrates, focusing on carbohydrate active proteins

INSTRUMENT(S): Q Exactive

ORGANISM(S): Chitinophaga Pinensis

SUBMITTER: Tina Rise Tuveng  

LAB HEAD: Vincent G.H. Eijsink

PROVIDER: PXD004305 | Pride | 2017-01-16

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
C.pinensis_submission.zip Other
Glc_t2_1.raw Raw
Glc_t2_1_2.raw Raw
Glc_t2_2.raw Raw
Glc_t2_2_2.raw Raw
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Publications

Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis.

Larsbrink Johan J   Tuveng Tina R TR   Pope Phillip B PB   Bulone Vincent V   Eijsink Vincent G H VG   Brumer Harry H   McKee Lauren S LS  

Journal of proteomics 20170106


Together with fungi, saprophytic bacteria are central to the decomposition and recycling of biomass in forest environments. The Bacteroidetes phylum is abundant in diverse habitats, and several species have been shown to be able to deconstruct a wide variety of complex carbohydrates. The genus Chitinophaga is often enriched in hotspots of plant and microbial biomass degradation. We present a proteomic assessment of the ability of Chitinophaga pinensis to grow on and degrade mannan polysaccharide  ...[more]

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