Proteomics

Dataset Information

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Serratia marcescens BJL200 secretome


ABSTRACT: Study the secretome of Serratia marcescens BJL200 upon growth on chitin.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Serratia Marcescens

SUBMITTER: Tina Rise Tuveng  

LAB HEAD: Vincent G.H. Eijsink

PROVIDER: PXD005225 | Pride | 2018-05-30

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
150805_A_30h_1.raw Raw
150805_A_48h_1.raw Raw
150805_B_20h_1.raw Raw
150805_B_20h_2.raw Raw
150805_B_20h_3.raw Raw
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Publications

Genomic, proteomic and biochemical analysis of the chitinolytic machinery of Serratia marcescens BJL200.

Tuveng Tina R TR   Hagen Live Heldal LH   Mekasha Sophanit S   Frank Jeremy J   Arntzen Magnus Øverlie MØ   Vaaje-Kolstad Gustav G   Eijsink Vincent G H VGH  

Biochimica et biophysica acta. Proteins and proteomics 20170124 4


The chitinolytic machinery of Serratia marcescens BJL200 has been studied in detail over the last couple of decades, however, the proteome secreted by this Gram-negative bacterium during growth on chitin has not been studied in depth. In addition, the genome of this most studied chitinolytic Serratia strain has until now, not been sequenced. We report a draft genome sequence for S. marcescens BJL200. Using label-free quantification (LFQ) proteomics and a recently developed plate-method for asses  ...[more]

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