Proteomics

Dataset Information

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Proteogenomic characterization of developmental defects in the forebrain resulting from hyperactivated mTOR signaling


ABSTRACT: Hyperactivated mTOR signaling in the developing brain by mutation of TSC1 genes has multiple forms of pathology including tuberous sclerosis complex (TSC). To examine the downstream networks affected in the developing brain by hyperactivated mTOR signaling, we performed an integrated analysis of transcriptomic and proteomic analysis of forebrain of wild-type and TSC1/Emx1-Cre mouse. Our results provide novel and fundamental molecular bases for understanding hyperactivaed mTOR signaling-induced brain defects which can in turn facilitate identification of potential diagnostic markers and therapeutic targets for mTOR signaling-related neurological disorders.

OTHER RELATED OMICS DATASETS IN: PRJNA360611

INSTRUMENT(S): Q Exactive

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Brain, Forebrain

SUBMITTER: Minhyung Kim  

LAB HEAD: Daehee Hwang

PROVIDER: PXD005768 | Pride | 2018-08-16

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Mouse_brain_FN01_PEMMR.mgf Mgf
Mouse_brain_FN01_PEMMR.mzid.gz Mzid
Mouse_brain_FN01_PEMMR.pride.mgf.gz Mgf
Mouse_brain_FN01_PEMMR.pride.mztab.gz Mztab
Mouse_brain_FN02_PEMMR.mgf Mgf
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Publications

Characterization of developmental defects in the forebrain resulting from hyperactivated mTOR signaling by integrative analysis of transcriptomic and proteomic data.

Shin Jiheon J   Kim Minhyung M   Jung Hee-Jung HJ   Cha Hye Lim HL   Suh-Kim Haeyoung H   Ahn Sanghyun S   Jung Jaehoon J   Kim YounAh Y   Jun Yukyung Y   Lee Sanghyuk S   Hwang Daehee D   Kim Jaesang J  

Scientific reports 20170606 1


Hyperactivated mTOR signaling in the developing brain has been implicated in multiple forms of pathology including tuberous sclerosis complex (TSC). To date, various phenotypic defects such as cortical lamination irregularity, subependymal nodule formation, dysmorphic astrocyte differentiation and dendritic malformation have been described for patients and animal models. However, downstream networks affected in the developing brain by hyperactivated mTOR signaling have yet to be characterized. H  ...[more]

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