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Sepioloidea lineolata MSMS

ABSTRACT: Sepioloidea lineolata, the striped pyjama squid (family Sepiadariidae), is a small species of benthic squid distributed along the Southern Indo-Pacific coast of Australia. All sepiadariid squids are known to secrete large volumes of viscous slime when stressed. The proteome of S. lineolata slime was analysed by combining high resolution mass spectrometry data with an S. lineolata transcriptome assembled from five tissues including slime. The composition of S. lineolata slime was also compared to that of the closely related S. austrinum (southern bottletail squid). Of the 550 protein groups identified in S. lineolata slime, 321 had orthologs in S. austrinum, and the abundance of these (iBAQ) was highly correlated between species. Both slimes were dominated by a small number of highly abundant proteins and several of these were short secreted proteins that had no homologues outside the class Cephalopoda. The extent of N-glycosylation in the slime of S. lineolata was also studied via glycan cleavage with PNGase-F. Four proteins had strong evidence of N-glycosylated, with treatment with PNGase-F showing a slight increase in peptide identification rates.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Sepioloidea Lineolata

TISSUE(S): Secretion

SUBMITTER: Nikeisha Caruana

LAB HEAD: Jan Maree Strugnell

PROVIDER: PXD010283 | Pride | 2022-02-28

REPOSITORIES: Pride

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Dataset's files

Source:

			Action	DRS
	MaxQuant_SL.zip	Other
	SLineolataMQ_20180206.fasta	Fasta
	Slime1P.mgf	Mgf
	Slime1P.raw	Raw
	Slime1_160309183003.raw	Raw

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