Proteomics

Dataset Information

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High-resolution spatial proteome map of Toxoplasma gondii extracellular tachyzoite


ABSTRACT: Apicomplexans, such as malaria-causing Plasmodium species, Toxoplasma, and Cryptosporidium, are parasitic protists that invade cells of virtually every animal, including humans. Despite the great burden on human healthcare and global economy, and the role in the environment, our understanding of the biology of these microorganisms is still very limited. Apicomplexans have evolved a complex cell architecture featuring a range of subcellular compartments, both common to all eukaryotes and unique to the phylum, that enable invasion into the host cell and exploiting its resources for growth and replication, rendering apicomplexans such remarkably successful parasites. In such an intricate subcellular landscape, protein function and location in the cell are tightly linked, which is why localising proteins in the cell is a major strategy in the apicomplexan research. Yet, the majority of proteins in model apicomplexans is unknown. In this project, a state-of-the-art spatial proteomics technology hyperLOPIT has been successfully adapted and applied to a model apicomplexan Toxoplasma gondii. Three independent hyperLOPIT experiments have been conducted on T. gondii strain RH extracellular tachyzoites, the invasive stage of the parasite's life cycle responsible for acute infection, providing the first cell-wide protein location atlas of any apicomplexan. This provides revolutionary insight into the apicomplexan cell organization and biology, including greatly expanded proteomes of secretory invasion organelles, the range of adaptive and regulatory responses of the organelles, and the subcellular distribution of evolutionary selection pressure, innovation, and conservation.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Toxoplasma Gondii

SUBMITTER: Konstantin Barylyuk  

LAB HEAD: Ross F. Waller

PROVIDER: PXD015269 | Pride | 2020-10-14

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
F099063.dat Other
F099542.dat Other
F101221.dat Other
KB_12_01_17_TMT_A1126.raw Raw
KB_12_01_17_TMT_A1227.raw Raw
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Publications

A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions.

Barylyuk Konstantin K   Koreny Ludek L   Ke Huiling H   Butterworth Simon S   Crook Oliver M OM   Lassadi Imen I   Gupta Vipul V   Tromer Eelco E   Mourier Tobias T   Stevens Tim J TJ   Breckels Lisa M LM   Pain Arnab A   Lilley Kathryn S KS   Waller Ross F RF  

Cell host & microbe 20201013 5


Apicomplexan parasites cause major human disease and food insecurity. They owe their considerable success to highly specialized cell compartments and structures. These adaptations drive their recognition, nondestructive penetration, and elaborate reengineering of the host's cells to promote their growth, dissemination, and the countering of host defenses. The evolution of unique apicomplexan cellular compartments is concomitant with vast proteomic novelty. Consequently, half of apicomplexan prot  ...[more]

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