Dataset Information

Proteomics of Hypnale hypnale (Hump-nosed pit viper) venom from the Western Ghats of India

ABSTRACT: Hypnale hypnale (hump-nosed pit viper) is considered to be one among the medically important venomous snake species of India and Sri Lanka. In the present study, venom proteome profiling of a single Hypnale hypnale from Western Ghats of India was achieved using SDS-PAGE based protein separation followed by LC-MS/MS analysis

INSTRUMENT(S): 6540 Q-TOF LC/MS

ORGANISM(S): Serpentes

SUBMITTER: Sudarslal Sadasivan Nair

LAB HEAD: Sudarslal Sadasivan Nair

PROVIDER: PXD017592 | Pride | 2020-03-19

REPOSITORIES: Pride

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Dataset's files

Source:

			Action	DRS
	HPV_Ingel_chymotrypsin.xml	Xml
	HPV_TRYPSIN.xml	Xml
	mascot_daemon_merge (F005118).mzid_mascot_daemon_merge_(F005118).pride.mgf.gz	Mzid
	mascot_daemon_merge (F005118).pride.mztab.gz	Mztab
	mascot_daemon_merge (F008984).mzid_mascot_daemon_merge_(F008984).pride.mgf.gz	Mzid

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Publications

Mass spectrometry-assisted venom profiling of Hypnale hypnale found in the Western Ghats of India incorporating de novo sequencing approaches.

Vanuopadath Muralidharan M Sajeev Nithin N Murali Athira Radhamony AR Sudish Nayana N Kangosseri Nithya N Sebastian Ivy Rose IR Jain Nidhi Dalpatraj ND Pal Amit A Raveendran Dileepkumar D Nair Bipin Gopalakrishnan BG Nair Sudarslal Sadasivan SS

International journal of biological macromolecules 20180707 Pt B

Hypnale hypnale (hump-nosed pit viper) is considered to be one among the medically important venomous snake species of India and Sri Lanka. In the present study, venom proteome profiling of a single Hypnale hypnale from Western Ghats of India was achieved using SDS-PAGE based protein separation followed by LC-MS/MS analysis. The identities of the proteins that were not established using the Mascot search were determined through de novo sequencing tools such as Novor followed by MS-BLAST based se ...[more]

PMID: 29990557

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