Proteomics

Dataset Information

0

Proteomic analysis of polysomes isolated from human cells infected with polio, zika or dengue viruses


ABSTRACT: Viral pathogens are an ongoing threat to public health worldwide. Dissecting their dependence on host biosynthetic pathways could lead to effective antiviral therapies. To define how entero- and flaviviruses redirect host ribosomes to synthesize viral proteins and disable host protein production, we performed proteomic analysis of lysates and isolated polysomes from human Huh7 cells infected with either polio, zika or dengue viruses. We find that infection remodels polysome composition along similar principles, without major changes to core ribosome stoichiometry. These viruses use different strategies to evictfrom polysomes a common set of translation initiation and RNA surveillance factors while recruiting host machineries specifically required for viral biogenesis. We also find that both zika and dengue utilize the collagen prolyl-hydroxylation machinery to mediate co-translational modification of conserved prolines in the viral polyprotein. Our findings show how RNA viruses co-opt polysome modularity and establish a powerful strategy to identify targets for selective antiviral interventions.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Hepatocyte, Cell Culture

SUBMITTER: Ranen Aviner  

LAB HEAD: Raul Andino

PROVIDER: PXD024546 | Pride | 2021-08-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
B20171030-03_Huh7_Mock_1.raw Raw
B20171030-04_Huh7_Mock_2.raw Raw
B20171030-05_Huh7_Mock_3.raw Raw
B20171030-06_Huh7_PV2h_1.raw Raw
B20171030-07_Huh7_PV2h_2.raw Raw
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Publications

Cotranslational prolyl hydroxylation is essential for flavivirus biogenesis.

Aviner Ranen R   Li Kathy H KH   Frydman Judith J   Andino Raul R  

Nature 20210818 7873


Viral pathogens are an ongoing threat to public health worldwide. Analysing their dependence on host biosynthetic pathways could lead to effective antiviral therapies<sup>1</sup>. Here we integrate proteomic analyses of polysomes with functional genomics and pharmacological interventions to define how enteroviruses and flaviviruses remodel host polysomes to synthesize viral proteins and disable host protein production. We find that infection with polio, dengue or Zika virus markedly modifies pol  ...[more]

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