Proteomics

Dataset Information

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Molecular composition of serum exosomes could discriminate rectal cancer patients with different responses to neoadjuvant radiotherapy


ABSTRACT: Exosomes may be used as biomarkers for the prediction and monitoring of response to anti-cancer treatment, yet relevant knowledge is very limited in the case of rectal cancer. Here we applied a combined proteomic and metabolomic approach to reveal exosome components connected with different responses to neoadjuvant radiotherapy in this group of patients and processes associated with identified discriminatory molecules. Moreover, the composition of serum-derived exosomes and a whole plasma was analyzed in parallel to compare the biomarker potential of both specimens, which revealed the highest capacity of exosome proteome to discriminate samples of patients with different responses to radiotherapy.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood Plasma, Blood Serum

DISEASE(S): Colorectal Adenocarcinoma

SUBMITTER: Lukasz Marczak  

LAB HEAD: Lukasz Marczak

PROVIDER: PXD031556 | Pride | 2022-04-04

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
checksum.txt Txt
exoA153.msf Msf
exoA153.raw Raw
exoA162.msf Msf
exoA162.raw Raw
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Publications


Identification of biomarkers that could be used for the prediction of the response to neoadjuvant radiotherapy (neo-RT) in locally advanced rectal cancer remains a challenge addressed by different experimental approaches. Exosomes and other classes of extracellular vesicles circulating in patients' blood represent a novel type of liquid biopsy and a source of cancer biomarkers. Here, we used a combined proteomic and metabolomic approach based on mass spectrometry techniques for studying the mole  ...[more]

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