Proteomics

Dataset Information

0

Employing Sterculic Acid–a naturally occurring 1, 2-cyclopropene fatty acid–for live-cell imaging of lipids by inverse electron-demand Diels-Alder reaction


ABSTRACT: To allow the study of unsaturated free fatty acids in live cells, we here report the use of sterculic acid, a 1,2-cyclopropene containing oleic acid analogue, as a bioorthogonal probe. We here show that this lipid can be readily taken up by dendritic cells without toxic side-effects, and that it can subsequently be visualised in live cells using an inverse electron-demand Diels-Alder (IEDDA) reaction with quenched tetrazine fluorophores. Furthermore, this reaction can be integrated into a multiplexed bioorthogonal reaction workflow by combining it with two sequential copper-catalysed Huisgen ligation reactions. This allows for the study of multiple biomolecules in the cell simultaneously by multimodal confocal imaging. Aside from lipid imaging, the uptake and protein modification of sterculic acid can be studied in live cells via chemical proteomics.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Dendritic Cell, Cell Culture

DISEASE(S): Disease Free

SUBMITTER: Berend Gagestein  

LAB HEAD: Mario van der Stelt

PROVIDER: PXD033831 | Pride | 2023-04-28

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
BERT_002_01.raw Raw
BERT_002_02.raw Raw
BERT_002_03.raw Raw
BERT_002_04.raw Raw
BERT_002_05.raw Raw
Items per page:
1 - 5 of 14
altmetric image

Publications

Live-Cell Imaging of Sterculic Acid-a Naturally Occurring 1,2-Cyclopropene Fatty Acid-by Bioorthogonal Reaction with Turn-On Tetrazine-Fluorophore Conjugates.

Bertheussen Kristine K   van de Plassche Merel M   Bakkum Thomas T   Gagestein Berend B   Ttofi Iakovia I   Sarris Alexi J C AJC   Overkleeft Herman S HS   van der Stelt Mario M   van Kasteren Sander I SI  

Angewandte Chemie (International ed. in English) 20220808 38


In the field of lipid research, bioorthogonal chemistry has made the study of lipid uptake and processing in living systems possible, whilst minimising biological properties arising from detectable pendant groups. To allow the study of unsaturated free fatty acids in live cells, we here report the use of sterculic acid, a 1,2-cyclopropene-containing oleic acid analogue, as a bioorthogonal probe. We show that this lipid can be readily taken up by dendritic cells without toxic side effects, and th  ...[more]

Similar Datasets

2020-04-22 | PXD018048 | Pride
2020-04-07 | PXD018165 | Pride
2020-04-22 | PXD017989 | Pride
2024-11-30 | E-MTAB-11097 | biostudies-arrayexpress
2008-05-23 | E-GEOD-9645 | biostudies-arrayexpress
2019-07-31 | E-MTAB-6124 | biostudies-arrayexpress
2015-04-01 | E-MTAB-3451 | biostudies-arrayexpress
2022-12-31 | E-MTAB-10581 | biostudies-arrayexpress
2020-06-11 | PXD019411 | JPOST Repository
2022-09-10 | PXD035430 | Pride