Proteomics

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Alterations in SHH signal transduction introduce a state of hypometabolism in sporadic Parkinson's disease


ABSTRACT: Sporadic Parkinson’s Disease (sPD) is a progressive neurodegenerative disorder caused by a combination of genetic and environmental factors, however, the etiology remains largely elusive. Here, we used human iPSCs from late onset sPD patients, which were cultivated in vitro for up to 60 passages and screened for known PD associated alterations. Following long-term in vitro cultivation, exclusively neural cells derived from sPD patients developed a reduced mitochondrial respiration and glucose consumption reflecting a sPD specific state of hypometabolism. Integrated analysis of transcriptome, proteome and non-targeted metabolome data identified the citric acid cycle as being the bottleneck in sPD metabolism. A 13C metabolic flux analysis further unraveled the α-ketoglutarate dehydrogenase complex as being central for a reduced flux through the citric acid cycle. This resulted in a substrate availability problem for the electron transport chain and thus a reduced mitochondrial ATP production. Notably, this alterations in basal cellular metabolism were introduced by altered SHH signal transduction due to dysfunctional primary cilia. Upon inhibiting the enhanced SHH signal transduction in sPD, glucose uptake and the activity of the α-ketoglutarate dehydrogenase complex could be restored. Thus, inhibiting overactive SHH signaling maybe a potential neuroprotective therapy for sPD.

INSTRUMENT(S): Orbitrap Exploris 480

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Brain, Dendritic Cell

DISEASE(S): Parkinson's Disease

SUBMITTER: Mario Oroshi  

LAB HEAD: Matthias Mann

PROVIDER: PXD038399 | Pride | 2023-10-05

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20210720_EXPL0_TuVu_PNC_1_1.raw Raw
20210720_EXPL0_TuVu_PNC_2_1.raw Raw
20210720_EXPL0_TuVu_PNC_3_1.raw Raw
20210720_EXPL0_TuVu_SA_PNC_10_1.raw Raw
20210720_EXPL0_TuVu_SA_PNC_10_2.raw Raw
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