Proteomics

Dataset Information

0

Proteotyping of sets of six microbial isolates by tandem mass spectrometry.


ABSTRACT: Proteotyping of mixtures of isolates was carried out by shotgun proteomics and phylopeptidomic interpretation to identify the microorganisms at the species taxonomical rank.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Sulfitobacter Indolifex Sagittula Stellata Marivirga Tractuosa Ruegeria Pomeroyi Saccharomyces Cerevisiae (baker's Yeast) Klebsiella Aerogenes

SUBMITTER: Jean ARMENGAUD  

LAB HEAD: Jean ARMENGAUD

PROVIDER: PXD044755 | Pride | 2024-05-02

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
CQDB_2023-08-21.fasta Fasta
F230539.dat Other
F230539_p0.05.mzid.gz Mzid
F230540.dat Other
F230540_p0.05.mzid.gz Mzid
Items per page:
1 - 5 of 129
altmetric image

Publications

A Simplified Label-Free Method for Proteotyping Sets of Six Isolates in a Single Liquid Chromatography-High-Resolution Tandem Mass Spectrometry Analysis.

Chabas Madisson M   Armengaud Jean J   Alpha-Bazin Béatrice B  

Journal of proteome research 20240207 3


Clinical diagnostics and microbiology require high-throughput identification of microorganisms. Sample multiplexing prior to detection is an attractive means to reduce analysis costs and time-to-result. Recent studies have demonstrated the discriminative power of tandem mass spectrometry-based proteotyping. This technology can rapidly identify the most likely taxonomical position of any microorganism, even uncharacterized organisms. Here, we present a simplified label-free multiplexing method to  ...[more]

Similar Datasets

2021-09-09 | PXD020976 | Pride
2024-11-06 | PXD049349 | Pride
2024-03-07 | PXD046290 | Pride
2024-03-07 | PXD046320 | Pride
2023-10-27 | PXD046460 | Pride
2023-12-21 | PXD045510 | Pride
2024-11-06 | PXD050353 | Pride
2024-11-06 | PXD040121 | Pride
2022-04-23 | PXD017720 | Pride
2024-03-07 | PXD045838 | Pride