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Interacting Partners of CHIKV nsP3 in Human Macrophages

ABSTRACT: Chikungunya virus (CHIKV), an alphavirus transmitted by mosquitoes, has instigated several epidemics in recent years, sparking intensive efforts to understand its biology. Despite progress, the understanding of CHIKV’s molecular interactions with host cell constituents, especially in susceptible cells such as macrophages remain limited. We used mass spectrometry platform to characterize the interactions between CHIKV-nsP3, a viral nonstructural protein, and proteins in human THP-1 macrophage cells. Our findings revealed 196 high-confidence interactions primarily involving nsP3. Further the sub-cellular localization, pathways these interacting proteins might be involved in were deduced using computational methods. The interacting partners were further incorporated into a comprehensive host virus interaction network derived from extensive literature on alphavirus-host interactions. Collectively, this study offers the first interaction map between CHIKV nsP3 protein and THP-1 cells, illuminating new probable roles of host cell proteins in CHIKV’s replication cycle.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Sujatha Sunil

LAB HEAD: Dr. Sujatha

PROVIDER: PXD045252 | Pride | 2024-03-06

REPOSITORIES: Pride

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			Action	DRS
	H1.raw	Raw
	H2.raw	Raw
	H3.raw	Raw
	ICGEB-HUMAN-UNIPROT.pdResult	Other
	c1.raw	Raw

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