Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lung Microbiome Dynamics in Cystic Fibrosis

ABSTRACT: Strain-resolved Dynamics of the Lung Microbiome in Patients with Cystic Fibrosis

PROVIDER: PRJEB32062 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3274620_1.fastq.gz	Fastqsanger.gz
	ERR3274620_2.fastq.gz	Fastqsanger.gz
	ERR3274630_1.fastq.gz	Fastqsanger.gz
	ERR3274630_2.fastq.gz	Fastqsanger.gz
	ERR3274621_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 52

Similar Datasets

Transcriptome profile of Primary Human Lung Fibroblasts (Cystic Fibrosis vs. Non-Cystic Fibrosis) [2D]

Project description:The transcriptomic profile of cystic fibrosis human lung fibroblasts was compared to normal human lung fibroblasts.

2020-06-15 | GSE141535 | GEO

GNPS-Cystic Fibrosis Lung Tissue Patient1

Project description:Left human lung associated with cystic fibrosis was sectioned in to small cubes and analyzed by sequencing and mass spectrometry

2016-04-15 | MSV000079652 | GNPS

Colorectal Cancer Screening in Cystic Fibrosis

Project description:This multi-center study will compare multi-target DNA and quantitative FIT stool-based testing to colonoscopy in individuals with Cystic Fibrosis (CF) undergoing colon cancer screening with colonoscopy. The primary endpoint is detection of any adenomas, including advanced adenomas and colorectal cancer (CRC).

| 2726863 | ecrin-mdr-crc

Transcriptome profile of Primary Human Lung Fibroblasts (Cystic Fibrosis vs. Non-Cystic Fibrosis)

Project description:Transcriptome profile of Primary Human Lung Fibroblasts (Cystic Fibrosis vs. Non-Cystic Fibrosis)

| PRJNA593827 | ENA

Transcriptome profile of Primary Human Lung Fibroblasts (Cystic Fibrosis vs. Non-Cystic Fibrosis) [2D]

Project description:Transcriptome profile of Primary Human Lung Fibroblasts (Cystic Fibrosis vs. Non-Cystic Fibrosis) [2D]

| PRJNA593833 | ENA

Expression data of cystic fibrosis and non-cystic fibrosis airway cell lines under oxidative stress

2012-08-03 | GSE39843 | GEO

Expression data of cystic fibrosis and non-cystic fibrosis airway cell lines under oxidative stress

Project description:CF's physiopathology is poorly explained by the mutation alone. The oxydative stress could be a major factor of this illness . Study its impact on transcriptome's CF cell line could be ameliorate our understanding of the evolution of cystic fibrosis. we used microarray technology to evaluate under oxydative stress, the transcriptional state of an epithelial lung cell issued from a human with cystic fibrosis and to identify a set of modulated genes associated to survival cell processes. the two cell lines are cultivated to Air-liquid Interface for RNA extraction and hybridization on Affymetrix microarrays. Each condition is triplicated. For the oxidative stress conditions, the two cell lines are treated on apical site by 15 µl of DMNQ (2,3-dimethoxy-1,4-naphtoquinone) ,concentrated at 15 µM, during 24 hours before RNA extraction.

2012-08-02 | E-GEOD-39843 | biostudies-arrayexpress

Bile's chronic effect on the Cystic Fibrosis lung pathogen Pseudomonas aeruginosa

Project description:Many patients with Cystic Fibrosis suffer from Gastroeosphgeal Refux Disease (GERD). This disease may lead to the aspiration of bile into the lungs. We invesigated the effect of bile on the CF lung pathogen P. aeruginosa. We analysed gene expression profiles, comparing bile treated and untreated cells to identified distinct classes of up/down-regulated genes. P. aeruginosa PAO1 was grown to log stage for RNA extraction and hybridization on Affymetrix microarrays. We conducted three biological replicates as to increase the resolution of expression profiles.

2016-08-01 | E-GEOD-77665 | biostudies-arrayexpress

GNPS-Cystic Fibrosis_Human lung tissue

Project description:This data was collected on lung tissue associated with cystic fibrosis from 3 patients

2015-12-01 | MSV000079398 | GNPS

Bile's chronic effect on the Cystic Fibrosis lung pathogen Pseudomonas aeruginosa

2016-08-01 | GSE77665 | GEO