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Transcriptome of Pneumocystis jirovecii TSA

ABSTRACT: We collected a single broncho alveolar lavage from single human patient with Pneumocystis jirovecii pneumonia. Total RNA was extracted using the Ribopure Yeast Kit (Ambion), according to the manufacturer's instructions. To obtain sufficient amount of RNA, total RNA was amplified using NuGEN OvationRNA-seq system and used to build a non-strand-specific library. The library was then sequenced using Illumina HiSeq 2000 technologies. The raw NGS data is archived in the ENA SRA and the trancriptome assembly is in ENA EMBL-bank.

PROVIDER: PRJEB400 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	accepted_hits.bam	Bam
	accepted_hits.bam.bai	Bam
	ERR135872.fastq.gz	Fastqsanger.gz
	ERR135872_1.fastq.gz	Fastqsanger.gz
	ERR135872_2.fastq.gz	Fastqsanger.gz

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