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M6A methylation regulates the fate of endogenous retrovirus transcripts [CRISPR/Cas9]

ABSTRACT: m6A methylation regulates the fate of endogenous retrovirus transcripts [CRISPR/Cas9]

PROVIDER: PRJNA607749 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR11122274.fastq.gz	Fastqsanger.gz
	SRR11122275.fastq.gz	Fastqsanger.gz
	SRR11122276.fastq.gz	Fastqsanger.gz
	SRR11122277.fastq.gz	Fastqsanger.gz
	SRR11122278.fastq.gz	Fastqsanger.gz

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m6A methylation regulates the fate of endogenous retrovirus transcripts [CRISPR/Cas9]

Project description:Using a genome-scale CRISPR knockout screening in mouse embryonic stem cells, we identify m6A RNA methylation as an important regulatory component that restricts the activity of endogenous retroviruses of the IAP (intracisternal A-particles) family. The m6A methylation of IAP mRNAs occurs on their 5’ end, is catalyzed by the complex of methyltransferase-like (METTL)3/METTL14 proteins whose depletion, along with other complex subunits, namely WTAP and ZC3H13, leads to increased IAP transcript abundance. Using auxin-dependent degron, we show that rapid removal of METTL3, METTL14 and ZC3H13 further increases IAP RNA abundance in a progressive and reversible fashion. Finally, we demonstrate that m6A RNA reduces the stability of IAP transcripts

2020-04-13 | GSE145615 | GEO