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M6A methylation regulates the fate of endogenous retrovirus transcripts [CUT & RUN]

ABSTRACT: m6A methylation regulates the fate of endogenous retrovirus transcripts [CUT & RUN]

PROVIDER: PRJNA656303 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR12424782_1.fastq.gz	Fastqsanger.gz
	SRR12424782_2.fastq.gz	Fastqsanger.gz
	SRR12424783_1.fastq.gz	Fastqsanger.gz
	SRR12424783_2.fastq.gz	Fastqsanger.gz
	SRR12424784_1.fastq.gz	Fastqsanger.gz

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m6A methylation regulates the fate of endogenous retrovirus transcripts [CUT & RUN]

Project description:Using a genome-scale CRISPR knockout screening in mouse embryonic stem cells, we identify m6A RNA methylation as an important regulatory component that restricts the activity of endogenous retroviruses of the IAP (intracisternal A-particles) family. The m6A methylation of IAP mRNAs occurs on their 5’ end, is catalyzed by the complex of methyltransferase-like (METTL)3/METTL14 proteins whose depletion, along with other complex subunits, namely WTAP and ZC3H13, leads to increased IAP transcript abundance. Using auxin-dependent degron, we show that rapid removal of METTL3, METTL14 and ZC3H13 further increases IAP RNA abundance in a progressive and reversible fashion. Finally, we demonstrate that m6A RNA reduces the stability of IAP transcripts

2020-08-11 | GSE156007 | GEO