Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Antibiotic resistance in Enterobacteriaceae from water sources in uMgungundlovu District, KwaZulu-Natal, South Africa

PROVIDER: PRJNA609073 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	JAANZR01.dat.gz	Other
	JAANZR01.fasta.gz	Fasta.gz
	JAANZR01.master.dat	Other
	JAANZS01.dat.gz	Other

Items per page:

1 - 5 of 19

Similar Datasets

Project description:Antibiotic resistance in Enterococcus species from water sources in uMgungundlovu District, KwaZulu-Natal, South Africa

| PRJNA609064 | ENA

Enterobacteriaceae

Project description:One Health Approach for Carbapenem resistant Enterobacteriaceae in KwaZulu-Natal, South Africa

| PRJNA564235 | ENA

Maize and Cercospora zeina transcriptome analysis during gray leaf spot foliar disease

Project description:Gray leaf spot (GLS) disease of maize is caused by the fungus Cercospora zeina in African countries, such as South Africa. The plant material was from maize inbred line B73-QTL, which was introgressed with a QTL region for resistance to GLS from the maize inbred line CML444 (Berger et al (2014) BMC Genetics 15 60 www.biomedcentral.com/1471-2156/15/60 ). This QTL was named 10G2_GLS and 10H_GLS from two field trials in KwaZulu-Natal province, South Africa in that study. B73-QTL plants were planted in the field, and subjected to natural infection with C. zeina. This was the same field trial as B73 plants that were sampled for RNAseq and the data reported in Swart et al (2017) Mol Plant Microbe Interact 30 710-724 (2017)(GSE94442). Samples were collected from lower leaves with moderate GLS lesions and younger upper leaves of the same B73-QTL plants with very few immature GLS lesions. The first aim of the experiment was to compare the maize transcriptomes during C.zeina challenge between B73 (from GSE94442 data) and B73-QTL plants (this study). The second aim was to identify novel transcripts expressed from the QTL region, which may underlie the quantitative disease resistance to GLS. The third aim was to identify C. zeina genes expressed in planta during infection.

2020-02-14 | GSE137198 | GEO

Project description:Evidence of Mycobacterium bovis DNA in Shared Water Sources at Livestock-Wildlife-Human Interfaces in KwaZulu-Natal, South Africa

| PRJNA1185125 | ENA

Mycobacterium tuberculosis

Project description:Whole genome sequencing of Mycobacterium tuberculosis in KwaZulu-Natal, South Africa

| PRJNA559528 | ENA

Project description:Molecular Epidemiology of Antibiotic Resistant ESKAPE Pathogens Isolated from Public Sector Hospitals in uMgungundlovu District, KwaZulu-Natal, South Africa Genome sequencing and assembly

| PRJNA417366 | ENA

Bacteria

Project description:Genomic Epidemiology of Antibiotic-Resistant Bacteria from Agricultural Soil Fertilized with Poultry Manure in KwaZulu Natal, South Africa

| PRJNA609650 | ENA

Molecular Epidemiology of Enterobacterales Resistant to Antibiotics of Last Resort in Pregnant Women in Labour at a Tertiary Hospital

Project description:This study aims to determine the epidemiology of Enterobacteriaceae resistant to antibiotics of last resort in pregnant women in labour at a tertiary hospital, Pretoria, South Africa. Rectal swabs shall be used to screen for colonisation with CRE and colistin-resistant Enterobacteriales in pregnant women during labour. Carbapenem and colistin-resistant Enterobacterales can cause the following infections: bacteraemia; nosocomial pneumonia; urinary tract infections, and intra-abdominal infections. Due to limited treatment options, infections caused by these multidrug-resistant organisms are associated with a mortality rate of 40-50%. Screening for colonisation of carbapenem-resistant Enterobacteriaceae (CRE) and colistin-resistant Enterobacteriaceae will help implement infection and prevention measures to limit the spread of these multidrug-resistant organisms.

2022-07-20 | GSE208573 | GEO

Staphylococcus

Project description:Molecular genomic profiling of Staphylococcus species from a Poultry farm System in KwaZulu-Natal, South Africa

| PRJNA506780 | ENA

Project description:Soil fungal diversity associated with burnt vs mulched trial plots in KwaZulu-Natal Province of South Africa

| PRJNA1003671 | ENA