Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lactobacillus

ABSTRACT: Lactobacillus draft genomes_Jiangnan University

PROVIDER: PRJNA658852 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12559500_1.fastq.gz	Fastqsanger.gz
	SRR12559500_2.fastq.gz	Fastqsanger.gz
	SRR12559600_1.fastq.gz	Fastqsanger.gz
	SRR12559600_2.fastq.gz	Fastqsanger.gz
	SRR12559700.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1538

Similar Datasets

Lactobacillus

Project description:Draft of genome Lactobacillus sp.

| PRJNA693057 | ENA

Comparative genome hybridization for Lactobacillus casei

Project description:Lactobacillus casei is remarkably adaptive to diverse habitats. To understand the evolution and adaptation of Lb. casei strains isolated from different environments, the gene content of 22 Lb. casei strains isolated from various habitats (cheeses, n=8; plant materials, n=8; and human sources, n=6) were examined by comparative genome hybridization with an Lb. casei ATCC 334-based microarray. Comparative genome hybridization was performed against an Affymetrix custom microarray designed to include 2,661 (97%) chromosomal and 17 (85%) plasmid CDSs predicted to occur in Lb. casei ATCC 334, as well as all predicted CDSs in the draft Lb. helveticus CNRZ 32 genome. CDSs that were not included in the microarray design were all transposase-encoding genes.

2010-06-21 | E-GEOD-15030 | biostudies-arrayexpress

Lactobacillus

Project description:Lactobacillus draft genomes (Raw data), including 14 species/subspecies of Lactobacillus genus.

| PRJNA788690 | ENA

Lactobacillus Membrane Vesicles

Project description:Bacterial membrane vesicles have been implicated in a broad range of functions in microbial communities from pathogenesis to gene transfer. Though first thought to be a phenomenon associated with Gram-negative bacteria, vesicle production in Staphylococcus aureus, Lactobacillus plantarum, and other Gram-positives has recently been described. Here we characterize MVs from three different Lactobacillus species (L. acidophilus, L. casei, and L. reuteri), determining that the size and protein composition of Lactobacillus-derived MVs have both similarities and differences with those produced by Gram-negative bacteria. Using proteomics, we identified more than 80 protein components from Lactobacillus-derived MVs, including some that were enriched in the vesicles themselves. For each species, vesicular proteins were categorized based on biological pathway and examined for subcellular localization signals in an effort to identify possible sorting mechanisms for MV proteins. Additionally, differences between MVs of other Lactobacillus species and Gram positive bacteria were highlighted. Information in this study will assist in elucidation of the formation and functions of MVs, as well as the development of therapeutic tools for vaccines, diagnosis, and therapeutic delivery.

2019-11-12 | PXD011278 | Pride

RNA_Seq of recipients mice with Klebsiella and Lactobacillus

Project description:We transplanted Klebsiella and Lactobacillus to germ free C57/B6J mice. All of the recipients mice were male. Here we report the intestine mRNA profiles of recipients mice with Klebsiella and Lactobacillus.

2024-10-01 | GSE185601 | GEO

Surfacome analysis of Lactobacillus rhamnosus GG and Lactobacillus rhamnosus Lc705

Project description:The present study reports comparative surfacomics (study of cell-surface exposed proteins) of the probiotic Lactobacillus rhamnosus strain GG and the dairy strain Lc705.

2016-07-01 | PXD001201 | Pride

Response to bile of Lactobacillus casei BL23

Project description:The response to bile of Lactobacillus casei BL23 was investigated.

2011-10-20 | GSE33047 | GEO

Comparative proteomics of Lactobacillus farciminis KB1089

Project description:We performed proteomic analysis with Lactobacillus farciminis KB1089, which is newly isolated, with or without induction.

2020-03-31 | PXD011820 | JPOST Repository

Lactobacillus surface layer glycosylation

Project description:the project aims to provide a glycomic and glycoproteomic approach to reveal S-layer glycosylation on lactobacillus kefiri aggregating and non-aggregating strains

2020-08-24 | PXD020358 | Pride

Lactobacillus

Project description:Lactobacillus salivarius and Lactobacillus reuteri

| PRJNA601071 | ENA