Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: The correlation between fecal bacterial microbiota, ecosystem associations, and conservation biology of Sapajus nigritus (Black Capuchin Monkey) primates in the wild and captivity

PROVIDER: PRJNA996088 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25319400_1.fastq.gz	Fastqsanger.gz
	SRR25319400_2.fastq.gz	Fastqsanger.gz
	SRR25319401_1.fastq.gz	Fastqsanger.gz
	SRR25319401_2.fastq.gz	Fastqsanger.gz
	SRR25319402_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 68

Similar Datasets

The correlation between fecal bacterial microbiota, ecosystem associations, and conservation biology of Sapajus nigritus (Black Capuchin Monkey) primates in the wild and captivity

Project description:Analysis of Sapajus nigritus (Black Capuchin Monkey) microbiome and correlation with environmental variables

| PRJEB64353 | ENA

Sapajus apella

Project description:Tufted capuchin monkey (Sapajus apella) genome sequencing and assembly

| PRJNA588076 | ENA

Sapajus

Project description:A phylogenomic perspective on the robust capuchin monkey (Sapajus) radiation

| PRJNA437057 | ENA

Sapajus nigritus

Project description:Sapajus nigritus Raw sequence reads

| PRJNA560884 | ENA

Project description:Fecal bacterial communities of wild black capuchin monkeys (Sapajus nigritus) from the Atlantic Forest biome in Southern Brazil are divergent from those of other non-human primates

| PRJEB35777 | ENA

Project description:White-faced capuchin monkey microbiome

| PRJNA932134 | ENA

Project description:COMPARISON OF THE GUT MICROBIOTA COMPOSITION BETWEEN WILD AND CAPTIVE BLACK CAPUCHIN MONKEYS (Sapajus nigritus) IN BRAZIL BY HIGH- THROUGHPUT SEQUENCING.

| PRJNA645460 | ENA

Generation of Naïve Induced Pluripotent Stem Cells from Rhesus Monkey Fibroblasts

Project description:Conventional embryonic stem cells (ESCs) or induced pluripotent stem cells (iPSCs) derived from primates resemble mouse epiblast stem cells, raising an intriguing question regarding whether the naïve pluripotent state resembling mouse embryonic stem cells (mESCs) exists in primates and how to capture it in vitro. Here we identified several specific signaling modulators that are sufficient to generate rhesus monkey fibroblast-derived iPSCs with the features of naïve pluripotency in terms of growth properties, gene expression profiles, self-renewal signaling, X-reactivation and the potential to generate cross-species chimeric embryos. Interestingly, together with recent reports of naïve human pluripotent stem cells, our findings suggest several conserved signaling pathways shared with rodents and specific to primates, providing significant insights for acquiring naïve pluripotency from other mammal species. In addition, the derivation of rhesus monkey naïve iPSCs also provides a valuable cell source for use in preclinical research and disease modeling. mRNA expression analysis of 4 rhesus monkey naive iPSC lines and 2 primed iPSC lines were examed.

2014-10-14 | E-GEOD-61420 | biostudies-arrayexpress

Analysis of developmental imprinting dynamics in primates using SNP-free methods to identify imprinting defects in cloned placenta

Project description:Our knowledge of genomic imprinting in primates is lagging behand that of mice largely due to the difficulties of allelic analyses in outbred animals. To understand imprinting dynamics in primates, we profiled transcriptomes, DNA methylomes and H3K27me3 in uniparental monkey embryos. We further developed single-nucleotide polymorphisms (SNP)-free methods, TARSII and CARSII, to identify germline differentially methylated regions (DMRs) in somatic tissues. Our comprehensive analyses showed that allelic DNA methylation, but not H3K27me3, is a major mark that correlates with paternal-biasedly expressed genes (PEGs) in uniparental monkey embryos. Interestingly, primate germline DMRs are different from PEG-associated DMRs in early embryos and are enriched in placenta. Strikingly, most placenta-specific germline DMRs are lost in placenta of cloned monkey. Collectively, our study establishes SNP-free germline DMR identification methods, defines developmental imprinting dynamics in primates and demonstrates imprinting defects in cloned monkey placenta, which provides important clues for improving primate cloning.

2021-09-07 | GSE159347 | GEO

Project description:Genomic Resources & Conservation Biology

| PRJNA785336 | ENA