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MetabolomicsAnalysis of colorectal adenocarcinoma tissue samples by DESI mass spectrometry imaging
Ex vivo colorectal adenocarcinoma samples were analysed by desorption electrospray ioni...
...files can be found in the zip file named after each tissue section.

Ref:
[1] Gerbig S, Golf O, Balog J, Denes J, Baranyai Z, Zarand A, Raso E, Timar J, Takats Z. Analysis of colorectal adenocarcinoma tissue by desorption electrospray ionization mass spectrometric imaging. Anal Bioanal Chem. 2012 Jun;403(8):2315-25. doi:10.1007/s00216-012-5841-x. PMID:22447214
2016-04-28 | MTBLS289 | MetaboLights
0
ProteomicsCore matrisome protein signature during periodontal ligament maturation from pre-occlusal eruption to occlusal function
The pre-occlusal eruption brings the rat molars into functional occlusion, which implicates tensional strains during mastication. We hypothesized that upon establishment of occlusion, the periodontal ligament undergoes cell and extracellular matrix maturation to adopt to this mechanical function. We ...
ORGANISM(S): Rattus Norvegicus (rat) 
2019-10-10 | PXD013379 | Pride
Periodontal ligament Tooth eruption Extracellular matrix Matrisome Occlusal forces 
0
Metabolomics3D DESI mass spectrometry imaging of 52 serial sections from a human colorectal adenocarcinoma
Fifty-two serial sections from a single human adenocarcinama are made available in this dataset. Four neighbouring sections were placed on a single slide and analysed together. The tissue sections were analysed by desorption electrospray ionisation mass spectrometry imaging (DESI-MSI) according to th...
2017-03-21 | MTBLS415 | MetaboLights
0
Metabolomics3D DESI mass spectrometry imaging of 51 serial sections from a human liver metastasis
51 serial sections from a single human liver metastasis are made available in this dataset. Four neighbouring sections were placed on a single slide and analysed together. The tissue sections were analysed by desorption electrospray ionisation mass spectrometry imaging (DESI-MSI) according to the pro...
2016-04-28 | MTBLS282 | MetaboLights
0
Unknown3-{[(E)-(2-Hydroxynaphthalen-1-yl)methylidene]amino}pyridinium per-chlorate.
Not available
S-EPMC3884464 | biostudies-literature
0
UnknownRetrospective Analysis of Prognostic Factors in Pediatric Patients with Adrenocortical Tumor from Unique Tertiary Center with Long-Term Follow-Up
Not available
S-EPMC9692695 | biostudies-literature
0
ProteomicsFormation of a protein corona on the surface of extracellular vesicles in blood plasma
In this study we tested whether a protein corona is formed around extracellular vesicles (EVs) in biofluids. We isolated nascent EVs of THP1 cells and platelets, and incubated them in EV-depleted platelet-free plasma from healthy subjects and patients with rheumatoid arthritis. EVs were subjected to ...
ORGANISM(S): Homo Sapiens (human) 
2022-02-15 | PXD020584 | Pride
extracellular vesicles blood plasma Protein corona  extracellular vesicles  blood plasma  rheumatoid arthritis  mass spectrometry  aggregation mass spectrometry aggregation Protein corona rheumatoid arthritis 
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TranscriptomicsTranscription profiling of Drosophila virgin mated to normal or spermless males to identify denes regulated by mating, sperm or Acps
Comparison of gene expression between females that were either virgin, mated to normal males, mated to spermless males (sons of tudor) or mated to sperm-less/Acp-less males (DTA-E).
ORGANISM(S): Drosophila melanogaster 
2008-06-11 | E-GEOD-1507 | biostudies-arrayexpress
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ProteomicsMechanistic basis for selective Mediator-dependence of cell type-specifying transcription
The Mediator complex routes signals from DNA-binding transcription factors to RNA polymerase (Pol) II. Despite its pivotal position, mechanistic understanding of Mediator in human cells remains incomplete. Here, we quantified Mediator-controlled Pol II kinetics by coupling rapid subunit degradation w...
ORGANISM(S): Homo Sapiens (human) 
2021-09-08 | PXD017611 | Pride
Human Chromatome Chromatin proteomics Lumos 
0
ProteomicsPhase separation of C9orf72 dipeptide repeats perturbs stress granule metabolism
Liquid-liquid phase separation (LLPS) of RNA binding proteins underlies the formation of multiple membraneless organelles involved in RNA metabolism, including stress granules. Defects in stress granule homeostasis constitute a corner stone of ALS/FTLD pathogenesis. Phase separation of ALS-linked str...
ORGANISM(S): Homo Sapiens (human) 
2017-04-26 | PXD005509 | Pride
Labelfree shotgun proteomics Arginine-rich dipeptide repeats Liquid-liquid phase separation Stress granules 
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