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Tissue-specific expression profiles in L. vannamei

ABSTRACT: RNA from different tissues of Litopenaeus vannamei was used to test the ability of the microarray to discriminate tissue-specific gene expression profiles Keywords: validation, tissue comparison RNA from circulating hemocytes, gills, hepatopancreas, or muscle (3 biological replicates each) was hybridized to the L. vannamei microarray. The number of hybridizing genes was noted and the relationships among the global profiles in each sample were determined by cluster analysis

ORGANISM(S): Litopenaeus vannamei

SUBMITTER: Yian Chen

PROVIDER: E-GEOD-4949 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Insights into the immune transcriptome of the shrimp Litopenaeus vannamei: tissue-specific expression profiles and transcriptomic responses to immune challenge.

Robalino Javier J Almeida Jonas S JS McKillen David D Colglazier Joan J Trent Harold F HF Chen Yian Ann YA Peck Megan E T ME Browdy Craig L CL Chapman Robert W RW Warr Gregory W GW Gross Paul S PS

Physiological genomics 20061205 1

Infectious disease constitutes a major obstacle to the sustainability of shrimp aquaculture worldwide and a significant threat to natural populations of shrimp and other crustacea. The study of the shrimp immune system, including the response to viral infection, has been hampered by a relative lack of molecular genetic information and of tools suitable for high-throughput assessment of gene expression. In this report, the generation of a cDNA microarray encompassing 2,469 putative unigenes expre ...[more]

PMID: 17148689

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