Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Single-cell RNA-Sequencing of testis tissue from 3 mouse species and their immediate crosses


ABSTRACT: We performed an inter-species comparison of murine spermatogenesis using the inbred strains C57B6J, CAST/EiJ and CAROLI/EiJ to investigate the cell type-specific evolution of gene expression levels among closely related species. We also used F1 crosses of C57B6J and CAST/EiJ to investigate context-specific regulatory effects on gene expression in cis and trans by measuring allele-specific expression (Goncalves et al. 2012; Wittkopp et al. 2021). To this end, single-cell RNA-Sequencing data was generated from dissociated testicular tissue in each mouse strain using the 10x Genomics scRNA-Seq platform.

INSTRUMENT(S): Illumina HiSeq 2500, Illumina NovaSeq 6000

ORGANISM(S): Mus musculus

SUBMITTER: Jasper Panten 

PROVIDER: E-MTAB-11602 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2015-07-07 | E-GEOD-67556 | biostudies-arrayexpress
2024-10-14 | E-MTAB-13586 | biostudies-arrayexpress
2024-04-10 | E-MTAB-13419 | biostudies-arrayexpress
2022-12-13 | E-MTAB-11561 | biostudies-arrayexpress
2024-10-14 | E-MTAB-13585 | biostudies-arrayexpress
2024-07-13 | E-MTAB-14214 | biostudies-arrayexpress
2022-06-10 | E-MTAB-11079 | biostudies-arrayexpress
2021-09-22 | E-MTAB-9839 | biostudies-arrayexpress
2020-04-12 | E-MTAB-8911 | biostudies-arrayexpress
2019-07-25 | E-MTAB-6902 | biostudies-arrayexpress