Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

37 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of Bordetella pertussis passage 1 and late-passage cultures grown in Bvg+ and Bvg- environmental conditions

ABSTRACT: Two strains of B. pertussis were serially passaged on plates in the laboratory. Global gene expression profiles were measured for passage 1 and late-passage cultures grown in Bvg+ and Bvg- environmental conditions.

INSTRUMENT(S): Scanning hardware

ORGANISM(S): Bordetella pertussis

SUBMITTER:

PROVIDER: E-TABM-59 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of Bordetella pertussis GMT-1 nicotinic acid dose curve

Project description:B. pertussis GMT-1 and a constitutive Bvg+ phase-locked mutant were grown at 37 degrees C in media containing a range of nicotinic acid concentrations

2006-03-31 | E-TABM-29 | biostudies-arrayexpress

Transcription profiling of Bordetella bronchiseptica RB50 nicotinic acid dose curve

Project description:B. bronchiseptica RB50 and a constitutive Bvg+ phase-locked mutant were grown at 37 degrees C in media containing a range of nicotinic acid concentrations.

2006-03-31 | E-TABM-28 | biostudies-arrayexpress

Transcription profiling of Bordetella pertussis GMT-1 magnesium sulfate shift

Project description:B. pertussis GMT-1 was grown in media containing magnesium sulfate to put the culture in the Bvg- phase. The cells were then washed and grown in media lacking magnesium sulfate and samples were harvested at time=0 and several time points beyond.

2006-03-31 | E-TABM-30 | biostudies-arrayexpress

Transcription profiling of 3 Bordetella bronchiseptica strains plus or minus nicotinic acid

Project description:Three B. bronchiseptica strains were grown at 37 degrees C in media containing or lacking nicotinic acid. Samples were harvested at mid-log phase and gene expression difference between the treated and untreated was measured for each strain.

2005-12-31 | E-TABM-27 | biostudies-arrayexpress

Comparison of the pre-passage wild-type strain H99W with two mouse-passaged strains

Project description:Changes in gene expression of the serotype A pre-passage wild-type strain H99W with two mouse-passaged strains were examined during log-phase growth at 37 ÂºC. Analysis included two replicates of each comparison with a Cy3-Cy5 dye swap

2016-08-11 | E-GEOD-59581 | biostudies-arrayexpress

Transcription profiling of Bordetella Bvg phase-locked mutants

Project description:bvgS phase-locked mutant derivatives of B. bronchiseptica RB50, B. pertussis GMT-1, and B. pertussis Tohama I were grown at 37 degrees C in the absence of modulator and harvested at mid-log phase. Comparison of gene expression profiles identified a set of genes in each strain that were regulated by BvgAS.

2006-03-31 | E-TABM-31 | biostudies-arrayexpress

Transcription profiling of Bordetella parapertussis strains isolated from humans and sheep

Project description:Global gene expression profiles were measured for B. parapertussis strains isolated from humans and sheep

2006-09-04 | E-TABM-95 | biostudies-arrayexpress

Comparative genomic hybridization of genomic DNA from two B. bronchiseptica strains and one B. pertussis strain and sequenced reference genomes by comparative genome hybridization (CGH)

Project description:Genomic DNA from two B. bronchiseptica strains and one B. pertussis strain were compared to the sequenced reference genomes by comparative genome hybridization (CGH).

2006-03-31 | E-MEXP-399 | biostudies-arrayexpress

Comparative genomic hybridization of B. pertussis chromosomal fragments separated by PFGE

Project description:The genomes of Bordetella pertussis strains with different passage histories were digested with a restriction endonuclease and separated by pulsed-field gel electrophoresis (PFGE). Each PFGE fragment was labeled and hybridized to a microarray to assess the genome content of the fragment.

2006-04-30 | E-TABM-58 | biostudies-arrayexpress

PatA-associated proteomics of Mycobacterium smegmatis

Project description:The wild type strain and patA deletion mutant of Mycobacterium smegmatis were determined proteomically

2023-05-17 | PXD038853 | Pride